Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2469
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000196-1|AAC24252.1| 158|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z79755-12|CAN86921.1| 142|Caenorhabditis elegans Hypothetical p... 36 0.026
Z79755-11|CAN86920.1| 209|Caenorhabditis elegans Hypothetical p... 36 0.026
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 32 0.32
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 32 0.32
Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical p... 32 0.43
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 29 2.3
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 29 2.3
Z35598-5|CAA84652.1| 628|Caenorhabditis elegans Hypothetical pr... 29 3.0
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 29 3.0
AF099002-3|AAO91691.1| 570|Caenorhabditis elegans Hypothetical ... 29 3.0
AF099002-2|AAC68740.2| 556|Caenorhabditis elegans Hypothetical ... 29 3.0
AF099002-1|AAK68587.1| 559|Caenorhabditis elegans Hypothetical ... 29 3.0
AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine r... 28 5.3
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 28 5.3
AC006780-3|AAF60649.2| 425|Caenorhabditis elegans Hypothetical ... 28 5.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 7.0
AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical... 28 7.0
U23452-11|AAK31548.1| 334|Caenorhabditis elegans Hypothetical p... 27 9.2
AF025472-3|AAB71075.2| 843|Caenorhabditis elegans Hypothetical ... 27 9.2
AC090999-21|AAK26150.1| 530|Caenorhabditis elegans Hypothetical... 27 9.2
>AF000196-1|AAC24252.1| 158|Caenorhabditis elegans Hypothetical
protein B0041.3 protein.
Length = 158
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Frame = +1
Query: 163 LKKYGSTCNHMKRNE--EYIKHVMSKGDTLQGIALKYGVTMEKIRRANRLFATDSLFLRE 336
+++YG+T + Y + + DTL+ IALK+ ++ + RAN+L++ +LF+++
Sbjct: 29 VRRYGTTQSQSSPVTPCSYTIYQVQTDDTLERIALKHNCSVSSLVRANKLWSPSALFMKQ 88
Query: 337 YLLIPVTKDSPFYENGERVTELPPPNHRASIAGMPTRNSFSPGSPDEKKSFDEFLNRVDS 516
++ IP+ N ++ L P +P S E+KS + L R+D
Sbjct: 89 FIRIPIF-------NSQQ-PNLKPSLQETQCKIVPATTE-RVDSSREEKSMKDILQRIDR 139
Query: 517 SLADIKR 537
++ ++
Sbjct: 140 NIKSFRK 146
>Z79755-12|CAN86921.1| 142|Caenorhabditis elegans Hypothetical
protein F43G9.2b protein.
Length = 142
Score = 35.9 bits (79), Expect = 0.026
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 211 YIKHVMSKGDTLQGIALKYGVTMEKIRRANRLFATDSLFLREYLLIPVTK 360
+I+ + GDTL +A+KY V + +I+R N + + + IPV++
Sbjct: 39 FIERKVKNGDTLNKLAIKYQVNVAEIKRVNNMVSEQDFMALSKVKIPVSR 88
>Z79755-11|CAN86920.1| 209|Caenorhabditis elegans Hypothetical
protein F43G9.2a protein.
Length = 209
Score = 35.9 bits (79), Expect = 0.026
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 211 YIKHVMSKGDTLQGIALKYGVTMEKIRRANRLFATDSLFLREYLLIPVTK 360
+I+ + GDTL +A+KY V + +I+R N + + + IPV++
Sbjct: 39 FIERKVKNGDTLNKLAIKYQVNVAEIKRVNNMVSEQDFMALSKVKIPVSR 88
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 32.3 bits (70), Expect = 0.32
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +1
Query: 358 KDSPFYENGERVTELPPPNHRASIAGMPTRNSFSPGSPDEKKSFDEFLNRVDSSLADIKR 537
KD+ Y + E EL P S A + S+SP S D+++S + +V + + R
Sbjct: 2055 KDTREYSDEELAQELSPSEEHVSTAEIKDIKSYSPTSSDDERSSQK--GKVSPPIPQV-R 2111
Query: 538 HVEKTKENSEFVKDIDEGYVRH 603
H SE + D+ H
Sbjct: 2112 HAISPSVASEVLSSHDDELAAH 2133
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 32.3 bits (70), Expect = 0.32
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +1
Query: 358 KDSPFYENGERVTELPPPNHRASIAGMPTRNSFSPGSPDEKKSFDEFLNRVDSSLADIKR 537
KD+ Y + E EL P S A + S+SP S D+++S + +V + + R
Sbjct: 2055 KDTREYSDEELAQELSPSEEHVSTAEIKDIKSYSPTSSDDERSSQK--GKVSPPIPQV-R 2111
Query: 538 HVEKTKENSEFVKDIDEGYVRH 603
H SE + D+ H
Sbjct: 2112 HAISPSVASEVLSSHDDELAAH 2133
>Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 31.9 bits (69), Expect = 0.43
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 439 PTRNSFSPGSPDEKKSFDEFLNRVDSSLADIKRHVEKTKENSEFVKDIDEGYVRHRPDGA 618
P P PD+ + FD+ L VD S + + + +E E + I G R G
Sbjct: 477 PKNAELPPLKPDDMQYFDKLLMDVDES--QLTKEEKNEREIMEHLLKIKNGTPPMRKSGL 534
Query: 619 TQTV--PRLWGASSSYNEVIP 675
+ R +GA +N+++P
Sbjct: 535 RKITENARKYGAGPLFNQILP 555
>Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 31.9 bits (69), Expect = 0.43
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 439 PTRNSFSPGSPDEKKSFDEFLNRVDSSLADIKRHVEKTKENSEFVKDIDEGYVRHRPDGA 618
P P PD+ + FD+ L VD S + + + +E E + I G R G
Sbjct: 477 PKNAELPPLKPDDMQYFDKLLMDVDES--QLTKEEKNEREIMEHLLKIKNGTPPMRKSGL 534
Query: 619 TQTV--PRLWGASSSYNEVIP 675
+ R +GA +N+++P
Sbjct: 535 RKITENARKYGAGPLFNQILP 555
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -2
Query: 353 TGINKYSLKNKLSVANNLLALLIFSIVTPYFNAIPCKVSPLDI 225
T IN YS +K S +L+ LL+F+ V P + + + P+DI
Sbjct: 110 TSIN-YSWISKKSSMTSLMLLLLFAFVQPCASIVEKRCGPIDI 151
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -2
Query: 353 TGINKYSLKNKLSVANNLLALLIFSIVTPYFNAIPCKVSPLDI 225
T IN YS +K S +L+ LL+F+ V P + + + P+DI
Sbjct: 107 TSIN-YSWISKKSSMTSLMLLLLFAFVQPCASIVEKRCGPIDI 148
>Z35598-5|CAA84652.1| 628|Caenorhabditis elegans Hypothetical
protein F10F2.7 protein.
Length = 628
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +1
Query: 436 MPTRNSFSPGSPDEKKSFDEFLNRVDSSLADIKRHVEKTKENSEFVKDIDEGYVRHRPDG 615
MP+R + P S KKS +RV+ L H++ EN + + + D
Sbjct: 1 MPSRTNSVPTSNRYKKSEFNNFSRVNQKLISDSSHLQNAFENFHALSLLCYTNAQVDRDW 60
Query: 616 ATQTVPRLWGASSSY 660
+ Q + WG +Y
Sbjct: 61 SFQQMCEFWGGEQTY 75
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +1
Query: 355 TKDSPFYENGERVTELPPPNHRASIAGMPTRNSFSPGSPDEKKSFDEFLNRVDSSLADIK 534
+K P E+GE T PPP + I + S P DEK+S + +S + K
Sbjct: 1246 SKKEPTTEDGEVKTPSPPPAKKTRIVDR-LKRSDEPSKKDEKESPKD----TESEKGEGK 1300
Query: 535 RHVEKTKE 558
+ E++K+
Sbjct: 1301 KRRERSKD 1308
>AF099002-3|AAO91691.1| 570|Caenorhabditis elegans Hypothetical
protein Y71H10B.1c protein.
Length = 570
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 472 DEKKSFDEFLNRVDSSLADIKRHVEKTKENSEFVKDI 582
D K FDE + ++S+LADI ++++ + VKDI
Sbjct: 367 DSKPLFDE-MGHMESTLADIYKNLDGASRHKPVVKDI 402
>AF099002-2|AAC68740.2| 556|Caenorhabditis elegans Hypothetical
protein Y71H10B.1a protein.
Length = 556
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 472 DEKKSFDEFLNRVDSSLADIKRHVEKTKENSEFVKDI 582
D K FDE + ++S+LADI ++++ + VKDI
Sbjct: 353 DSKPLFDE-MGHMESTLADIYKNLDGASRHKPVVKDI 388
>AF099002-1|AAK68587.1| 559|Caenorhabditis elegans Hypothetical
protein Y71H10B.1b protein.
Length = 559
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 472 DEKKSFDEFLNRVDSSLADIKRHVEKTKENSEFVKDI 582
D K FDE + ++S+LADI ++++ + VKDI
Sbjct: 356 DSKPLFDE-MGHMESTLADIYKNLDGASRHKPVVKDI 391
>AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine
receptor, class h protein82 protein.
Length = 360
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 246 QGVPFRHNMFNVFLVPFHVVAGASILF 166
QGV + + VF +PF++ G ILF
Sbjct: 26 QGVAYTFHSITVFSIPFYIFGGYCILF 52
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 121 LFDERVSIRESARPLKKYGSTCNHMKRNEEYIKH 222
LF+ER E AR + KYG R EE KH
Sbjct: 266 LFEERQKEHERARGIFKYGLDNLPSNRTEEIFKH 299
>AC006780-3|AAF60649.2| 425|Caenorhabditis elegans Hypothetical
protein Y47D9A.5 protein.
Length = 425
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 557 SFVFSTCRFMSANDESTLFRNSSKL 483
S + + C S +DEST F+N+SKL
Sbjct: 35 SILLTGCNLTSFSDESTNFKNNSKL 59
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 346 IPVTKDSPFYENGERVTELPPPNHRASIAGMP 441
+P+ K + E GE V +PPPN + + P
Sbjct: 641 LPIEKKLLYKETGETVISIPPPNIQPPVPHPP 672
>AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical
protein Y119C1B.1 protein.
Length = 273
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 528 HKATCRKNKRKQ*VREGYR*GLREAQARR 614
H+++ RK R+ VR+G R G+R+ ++R+
Sbjct: 104 HRSSNRKRDREDDVRDGSRKGVRDGRSRK 132
>U23452-11|AAK31548.1| 334|Caenorhabditis elegans Hypothetical
protein R07G3.8 protein.
Length = 334
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 581 ISFTNSLFSFVFSTCRFMSANDE 513
I+ T +F + + CRFM ANDE
Sbjct: 225 INNTTDVFVTIINVCRFMLANDE 247
>AF025472-3|AAB71075.2| 843|Caenorhabditis elegans Hypothetical
protein ZK250.6 protein.
Length = 843
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/57 (22%), Positives = 30/57 (52%)
Frame = +1
Query: 43 TKFWFSSGLSTLWMSYLKTSNMEEERLFDERVSIRESARPLKKYGSTCNHMKRNEEY 213
T++ F +G + W ++ ++MEE + ++ + I A+ ++ G + NEE+
Sbjct: 783 TQYTFKAGYDSGWDKIIRWNDMEERFMVNDSIIIEVRAKIVEMTGCEDDVDDLNEEF 839
>AC090999-21|AAK26150.1| 530|Caenorhabditis elegans Hypothetical
protein Y82E9BR.2 protein.
Length = 530
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 448 NSFSPGSPDEKKSFDEFLNRVDSSLADIKRHVE-KTKENSEFVK 576
N +P + + KKS +F+ + ++ IK+HV+ +TK S+ V+
Sbjct: 390 NLVTPDADNVKKSDVKFIKKRRRAMNSIKKHVDIRTKSRSKSVR 433
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.132 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,772,112
Number of Sequences: 27780
Number of extensions: 342517
Number of successful extensions: 1233
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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