Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2463
(354 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0309 - 20100231-20100307,20100362-20100503,20100588-201009... 35 0.021
10_08_0533 + 18592177-18592581,18592674-18593906 31 0.26
08_02_1461 - 27299891-27301870 30 0.45
08_01_0304 - 2502760-2502774,2502844-2502921,2503035-2503103,250... 30 0.60
07_03_1764 + 29322683-29323387,29323809-29323889,29323968-293240... 29 1.1
02_05_0482 + 29382696-29383251,29383376-29383692 29 1.1
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 27 4.2
01_05_0048 - 17561963-17563585 27 4.2
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 27 5.6
06_01_0397 + 2855273-2855347,2855515-2855606,2856317-2856347,285... 27 5.6
03_06_0720 + 35739383-35739391,35739802-35740275,35740695-357411... 27 5.6
03_01_0389 + 3021849-3022136,3022237-3022753,3022835-3022988,302... 27 5.6
12_02_0640 - 21447470-21448309 26 7.4
12_02_0635 - 21430245-21431156 26 7.4
07_01_1120 - 10338265-10338624,10338739-10338873,10339411-10340451 26 7.4
07_03_1609 + 28128275-28128380,28128941-28129128,28129238-281294... 26 9.8
07_01_0323 - 2264356-2264650,2265519-2266294 26 9.8
06_03_0743 + 24069752-24070483,24071890-24072345 26 9.8
06_03_0505 + 21545547-21545813,21546075-21546167,21546535-215467... 26 9.8
06_03_0311 + 19466258-19466303,19466496-19467087,19468059-194685... 26 9.8
06_01_0216 - 1641914-1642381,1642471-1642725 26 9.8
>05_04_0309 -
20100231-20100307,20100362-20100503,20100588-20100967,
20101049-20101076,20101182-20101306,20101402-20101457,
20101709-20101791,20101881-20101949,20102050-20102640
Length = 516
Score = 34.7 bits (76), Expect = 0.021
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 45 SDALVFESHRRVPIFQMKYVLNKCSRLTSTVKGITSCNKNQTRKIIICVITG 200
SDA +FES RR+ + Q+ K + + V G+ N Q R ++ +I G
Sbjct: 198 SDATLFESLRRLQLMQLSVSTLKATEIGRAVNGLRKHNSQQIRHLVRTLIEG 249
>10_08_0533 + 18592177-18592581,18592674-18593906
Length = 545
Score = 31.1 bits (67), Expect = 0.26
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 354 PPPP*KQSFKGFKEKKRTAAPPPFKPKRITASRQK*AGWWYPPARTHQRS 205
PPPP +Q + + + TA+P P KP+ + + ++ A PP R + S
Sbjct: 33 PPPPPRQPQEDSVDDEETASPSPGKPQEGSVAAEERASPSPPPPRRKKDS 82
>08_02_1461 - 27299891-27301870
Length = 659
Score = 30.3 bits (65), Expect = 0.45
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -2
Query: 290 HPSNRNALLLHGRNRQGGGTHPRGLTRGPTTS 195
H ++ LL GR R GGG H RGL P S
Sbjct: 282 HAADLRKKLLRGRRRGGGGGHRRGLFVFPLVS 313
>08_01_0304 -
2502760-2502774,2502844-2502921,2503035-2503103,
2503200-2503289,2503400-2503517,2505548-2505678,
2505756-2506025,2507175-2507308,2507635-2508088
Length = 452
Score = 29.9 bits (64), Expect = 0.60
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 41 VERCTGVRIPQASTNFSNEIRTQQMFTIDFHGEGNN 148
+ RCTGV I N +I T DFHGE +N
Sbjct: 157 ISRCTGVVIGWDGANKRAKILTAASVVCDFHGELHN 192
>07_03_1764 +
29322683-29323387,29323809-29323889,29323968-29324072,
29324453-29325382,29326728-29326856,29326953-29327042,
29327237-29327293,29327362-29327394
Length = 709
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -2
Query: 311 RNGRLPPHPSNRNALLLHGRNRQGGGTHPRGLTRGPTTSNYANYNFAG 168
R G PHP +R +G R+GGG+ GL G + Y G
Sbjct: 96 RRGSCSPHPQDR-----YGSGRRGGGSGRGGLVDGDRSGGGDRYGAGG 138
>02_05_0482 + 29382696-29383251,29383376-29383692
Length = 290
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2
Query: 323 VSKKRNGRLPPHPSNRNALLLHGRNRQGGGTHPRGLTRGPTT 198
+S+KR G PP P R G+ R+GGG G+ G TT
Sbjct: 38 LSRKRLGAKPPSPQRRG-----GQEREGGGDEAAGM--GTTT 72
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 297 APPPFKPKRITASRQK*AG 241
APPP +PKR+ R+K AG
Sbjct: 82 APPPPQPKRLQGGRKKGAG 100
>01_05_0048 - 17561963-17563585
Length = 540
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 322 FQRKETDGCPPTLQTET 272
FQR E DGC P L T T
Sbjct: 422 FQRMERDGCEPELNTYT 438
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 354 PPPP*KQSFKGFKEKKRTAAPPPFKP 277
PPPP K K+++ PPP KP
Sbjct: 68 PPPPTKPKHPKPKQQQHPPPPPPQKP 93
>06_01_0397 +
2855273-2855347,2855515-2855606,2856317-2856347,
2856687-2856830,2856935-2857162,2857374-2857487,
2857749-2858249
Length = 394
Score = 26.6 bits (56), Expect = 5.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 354 PPPP*KQSFKGFKEKKRTAAPPPFKPKRITASRQK 250
P PP ++ +K + A PP KPK + +QK
Sbjct: 348 PSPPDQKKPVARVQKAKAAGPPKAKPKDMKGGQQK 382
>03_06_0720 +
35739383-35739391,35739802-35740275,35740695-35741122,
35741273-35741351
Length = 329
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 260 HGRNRQGGGTHPRGLTRGPTTSNY 189
HG+ R+GG PRG T S Y
Sbjct: 18 HGQQRRGGSPPPRGRTTSVYRSGY 41
>03_01_0389 +
3021849-3022136,3022237-3022753,3022835-3022988,
3023076-3023166,3024556-3024627,3026366-3026689
Length = 481
Score = 26.6 bits (56), Expect = 5.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 311 RNGRLPPHPSNRNALLLHGRNRQGGGTHPRGLTRG 207
+NGR HP +R + G NR+G G G RG
Sbjct: 165 QNGRYGSHPHSRGSGYGGGGNRRGNGGGGGGGRRG 199
>12_02_0640 - 21447470-21448309
Length = 279
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 354 PPPP*KQSFKGFKEKKRTAAPPPFKPKR 271
PPP ++S + + RT PPP PK+
Sbjct: 212 PPPERRESPSPPRGRPRTPPPPPGSPKK 239
>12_02_0635 - 21430245-21431156
Length = 303
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 354 PPPP*KQSFKGFKEKKRTAAPPPFKPKR 271
PPP ++S + + RT PPP PK+
Sbjct: 209 PPPERRESPSPPRGRPRTPPPPPGSPKK 236
>07_01_1120 - 10338265-10338624,10338739-10338873,10339411-10340451
Length = 511
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 354 PPPP*KQSFKGFKEKKRTAAPPPFKPKR 271
PPPP +G + +K A PP +P+R
Sbjct: 8 PPPPPLTRKRGREARKSKEAAPPREPRR 35
>07_03_1609 +
28128275-28128380,28128941-28129128,28129238-28129415,
28130753-28130973
Length = 230
Score = 25.8 bits (54), Expect = 9.8
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 293 PHPSNRNALLLHGRNRQGGGTHPRGLTRGPTTS-NYANY 180
P PS R+A+L NR G HP+ + R N+ Y
Sbjct: 11 PQPSPRHAILAQLDNRAMLGLHPQHVLRSHAQEVNFVRY 49
>07_01_0323 - 2264356-2264650,2265519-2266294
Length = 356
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 262 FTAEIGRVVVPTRADSPEVLPPVITQIIILRVWFLLHDVIPF 137
F E+G V+ A+ +++ T +I+ VW L IP+
Sbjct: 310 FAQELGMVLQSIDAEDVKMVIDTFTNLILENVWAFLVGKIPY 351
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 354 PPPP*KQSFKGFKEKKRTAAPPPFKP 277
PPPP SF G PPP P
Sbjct: 31 PPPPYAASFSGLYSSYLHPPPPPSSP 56
>06_03_0505 +
21545547-21545813,21546075-21546167,21546535-21546747,
21548933-21549124,21549217-21550197
Length = 581
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 296 PPHPSNRNALLLHGRNRQGGG 234
PP S+R LL+ +NR GGG
Sbjct: 363 PPATSDRRIELLNTQNRMGGG 383
>06_03_0311 +
19466258-19466303,19466496-19467087,19468059-19468524,
19470028-19470081,19470112-19470226,19470499-19470605
Length = 459
Score = 25.8 bits (54), Expect = 9.8
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -2
Query: 287 PSNRNALLLHGRNRQGGGTHPRGLTRGPTTSNYANYNFAGLVFIT 153
P R + G +Q L P T A NFAGL F++
Sbjct: 337 PDGRTMVYNVGLMQQSTSAASLSLAASPATKTDAKKNFAGLCFLS 381
>06_01_0216 - 1641914-1642381,1642471-1642725
Length = 240
Score = 25.8 bits (54), Expect = 9.8
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +2
Query: 221 RAGGYHHPAYF--CREAVMRFGLKGGGAA 301
R+ G HHP YF +EA+M L G G A
Sbjct: 74 RSAGPHHPPYFEMIKEAIM--ALDGNGKA 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,229,495
Number of Sequences: 37544
Number of extensions: 304088
Number of successful extensions: 875
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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