BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2463
(354 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF520715-1|AAM55244.1| 4723|Drosophila melanogaster MICAL long i... 28 3.0
BT024389-1|ABC86451.1| 122|Drosophila melanogaster IP05464p pro... 27 9.1
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 27 9.1
AJ245406-1|CAB76253.1| 4001|Drosophila melanogaster kettin protein. 27 9.1
AE014296-406|AAF47604.1| 4796|Drosophila melanogaster CG1915-PA,... 27 9.1
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 27 9.1
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P... 27 9.1
AB026845-1|BAA90301.2| 4796|Drosophila melanogaster kettin protein. 27 9.1
>AF520715-1|AAM55244.1| 4723|Drosophila melanogaster MICAL long
isoform protein.
Length = 4723
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 351 PPP*KQSFKGFKEKKRTAAPPPFKP 277
P P K+ + F +K R+ +P PFKP
Sbjct: 2799 PSPRKRGSQRFMDKPRSQSPQPFKP 2823
>BT024389-1|ABC86451.1| 122|Drosophila melanogaster IP05464p
protein.
Length = 122
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 332 VLRVSKKRNGRL-PPHPSNRNALLLHGRNRQGGGTH 228
++R+ K + ++ PPH NR + G N GGG H
Sbjct: 10 LIRIKKSKTFKMSPPHHENRLFGIHLGLNLGGGGHH 45
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 26.6 bits (56), Expect = 9.1
Identities = 26/100 (26%), Positives = 41/100 (41%)
Frame = -3
Query: 301 GCPPTLQTETHYCFTAEIGRVVVPTRADSPEVLPPVITQIIILRVWFLLHDVIPFTVEVN 122
G PP TE + A+IG + A L PV Q +++ WF V+ + V
Sbjct: 3026 GIPPRFTTE--FVNIADIGEGEL---AHFEANLIPVGDQSMVIE-WFYNGKVLEASHRVR 3079
Query: 121 REHLLSTYFI*KIGTRLWDSNTSASLNTNAPDVLXPSCRI 2
+ T + +GT++ D+ T TN SC +
Sbjct: 3080 TIYAFGTVALEVLGTKIEDTGTYTCRATNKHGTAEISCNL 3119
>AJ245406-1|CAB76253.1| 4001|Drosophila melanogaster kettin protein.
Length = 4001
Score = 26.6 bits (56), Expect = 9.1
Identities = 26/100 (26%), Positives = 41/100 (41%)
Frame = -3
Query: 301 GCPPTLQTETHYCFTAEIGRVVVPTRADSPEVLPPVITQIIILRVWFLLHDVIPFTVEVN 122
G PP TE + A+IG + A L PV Q +++ WF V+ + V
Sbjct: 3028 GIPPRFTTE--FVNIADIGEGEL---AHFEANLIPVGDQSMVIE-WFYNGKVLEASHRVR 3081
Query: 121 REHLLSTYFI*KIGTRLWDSNTSASLNTNAPDVLXPSCRI 2
+ T + +GT++ D+ T TN SC +
Sbjct: 3082 TIYAFGTVALEVLGTKIEDTGTYTCRATNKHGTAEISCNL 3121
>AE014296-406|AAF47604.1| 4796|Drosophila melanogaster CG1915-PA,
isoform A protein.
Length = 4796
Score = 26.6 bits (56), Expect = 9.1
Identities = 26/100 (26%), Positives = 41/100 (41%)
Frame = -3
Query: 301 GCPPTLQTETHYCFTAEIGRVVVPTRADSPEVLPPVITQIIILRVWFLLHDVIPFTVEVN 122
G PP TE + A+IG + A L PV Q +++ WF V+ + V
Sbjct: 3026 GIPPRFTTE--FVNIADIGEGEL---AHFEANLIPVGDQSMVIE-WFYNGKVLEASHRVR 3079
Query: 121 REHLLSTYFI*KIGTRLWDSNTSASLNTNAPDVLXPSCRI 2
+ T + +GT++ D+ T TN SC +
Sbjct: 3080 TIYAFGTVALEVLGTKIEDTGTYTCRATNKHGTAEISCNL 3119
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 26.6 bits (56), Expect = 9.1
Identities = 26/100 (26%), Positives = 41/100 (41%)
Frame = -3
Query: 301 GCPPTLQTETHYCFTAEIGRVVVPTRADSPEVLPPVITQIIILRVWFLLHDVIPFTVEVN 122
G PP TE + A+IG + A L PV Q +++ WF V+ + V
Sbjct: 3026 GIPPRFTTE--FVNIADIGEGEL---AHFEANLIPVGDQSMVIE-WFYNGKVLEASHRVR 3079
Query: 121 REHLLSTYFI*KIGTRLWDSNTSASLNTNAPDVLXPSCRI 2
+ T + +GT++ D+ T TN SC +
Sbjct: 3080 TIYAFGTVALEVLGTKIEDTGTYTCRATNKHGTAEISCNL 3119
>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
protein.
Length = 4129
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 354 PPPP*KQSFKGFKEKKRTAAPPPFKPKRITASR 256
PPPP + K K ++PPP PK IT ++
Sbjct: 410 PPPPPQAQVKEVTPVKVVSSPPP--PKEITPAK 440
>AB026845-1|BAA90301.2| 4796|Drosophila melanogaster kettin protein.
Length = 4796
Score = 26.6 bits (56), Expect = 9.1
Identities = 26/100 (26%), Positives = 41/100 (41%)
Frame = -3
Query: 301 GCPPTLQTETHYCFTAEIGRVVVPTRADSPEVLPPVITQIIILRVWFLLHDVIPFTVEVN 122
G PP TE + A+IG + A L PV Q +++ WF V+ + V
Sbjct: 3026 GIPPRFTTE--FVNIADIGEGEL---AHFEANLIPVGDQSMVIE-WFYNGKVLEASHRVR 3079
Query: 121 REHLLSTYFI*KIGTRLWDSNTSASLNTNAPDVLXPSCRI 2
+ T + +GT++ D+ T TN SC +
Sbjct: 3080 TIYAFGTVALEVLGTKIEDTGTYTCRATNKHGTAEISCNL 3119
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,929,409
Number of Sequences: 53049
Number of extensions: 495968
Number of successful extensions: 1175
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -