Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2463
         (354 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   4.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   5.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   5.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    20   7.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   9.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   9.9  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 17/54 (31%), Positives = 21/54 (38%)
 Frame = -3

Query: 208 VLPPVITQIIILRVWFLLHDVIPFTVEVNREHLLSTYFI*KIGTRLWDSNTSAS 47
           VLP  I  ++ + +   L      T  VNR HL         GT  WDS    S
Sbjct: 231 VLPMTIIIVLYILIAIKLRRSRMLTATVNRNHLSG-------GTNHWDSGRRKS 277


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 250 IGRVVVPTRADS-PEVLPPVITQIIILRVWFL 158
           + R +  TR  S P+++ P   ++++  VW L
Sbjct: 161 LDRYLAVTRPVSYPQIMSPRRARLLVATVWIL 192


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = -2

Query: 284 SNRNALLLHGRNRQGGGTHPRGLTRGPTTSNYA-NYNFAGLVFITRCYSLHRGSQS*TFV 108
           +  NA+LL GR+++     P G T        A N +    VF    +++   +    F 
Sbjct: 366 TKENAMLLSGRSQKSTTGPPPGPTPAQKARMRALNIDRVSRVFFPFLFAVLNVTYWIMFA 425

Query: 107 EYV 99
           EY+
Sbjct: 426 EYI 428


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 199 VVGPLVSPRGWVPPPCLFLP*SSNA 273
           VVG  +S   W+ P  + +P S++A
Sbjct: 538 VVGSGLSHGNWIYPASMTIPGSNSA 562


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 82  GTRLWDSNTSASLNT 38
           G   WD+NT  + NT
Sbjct: 320 GIACWDTNTELNPNT 334


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 284  SNRNALLLHGRNRQGGGTHPRGLT 213
            S  +++LLH ++   GG    G T
Sbjct: 1415 STSSSILLHWKSGHNGGASLTGYT 1438


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 284  SNRNALLLHGRNRQGGGTHPRGLT 213
            S  +++LLH ++   GG    G T
Sbjct: 1411 STSSSILLHWKSGHNGGASLTGYT 1434


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,653
Number of Sequences: 438
Number of extensions: 3412
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)