Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2459
(442 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 134 2e-32
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 134 2e-32
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 134 2e-32
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 116 1e-26
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 109 9e-25
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 109 9e-25
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 105 2e-23
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 105 2e-23
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 87 4e-18
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 87 4e-18
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 87 4e-18
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 86 9e-18
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 85 2e-17
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 85 2e-17
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 83 1e-16
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 81 3e-16
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 81 3e-16
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 81 3e-16
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 81 3e-16
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 81 3e-16
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 81 3e-16
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 81 3e-16
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 80 6e-16
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 75 3e-14
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 75 3e-14
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 75 3e-14
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 75 3e-14
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 74 4e-14
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 73 1e-13
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 73 1e-13
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 73 1e-13
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 71 4e-13
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 69 2e-12
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 67 5e-12
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 67 5e-12
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 62 1e-10
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 58 4e-09
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 53 8e-08
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 53 8e-08
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 53 8e-08
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 52 2e-07
AC132211-4|AAN01432.2| 238|Caenorhabditis elegans Hypothetical ... 50 6e-07
AC024789-1|AAK85500.1| 238|Caenorhabditis elegans Hypothetical ... 50 6e-07
AF016417-3|AAB65281.1| 457|Caenorhabditis elegans Hypothetical ... 32 0.21
AF024493-10|AAK68346.1| 232|Caenorhabditis elegans C. elegans N... 29 1.1
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 27 6.0
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 27 6.0
AF039718-3|AAB96744.1| 329|Caenorhabditis elegans Hypothetical ... 27 6.0
Z54235-2|CAA90972.2| 371|Caenorhabditis elegans Hypothetical pr... 27 8.0
U23172-3|AAC46526.1| 547|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 134 bits (325), Expect = 2e-32
Identities = 66/104 (63%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVI- 180
VR VF+KA PCILFFDE DSLAPKRGHDSTGVTDRVVNQLL +DGAEGG +G +I
Sbjct: 84 VRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIIL 143
Query: 181 AATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNL 312
TSR DL+D ALLR GR H+YC P++ R +I+ LT L
Sbjct: 144 GCTSRIDLIDDALLRPGRFDHHVYCGHPEKTERLDIMKVLTNKL 187
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 134 bits (325), Expect = 2e-32
Identities = 66/104 (63%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVI- 180
VR VF+KA PCILFFDE DSLAPKRGHDSTGVTDRVVNQLL +DGAEGG +G +I
Sbjct: 810 VRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIIL 869
Query: 181 AATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNL 312
TSR DL+D ALLR GR H+YC P++ R +I+ LT L
Sbjct: 870 GCTSRIDLIDDALLRPGRFDHHVYCGHPEKTERLDIMKVLTNKL 913
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 10 DVFDKADMKRPCILFFDEFDSLAPK 84
D + ++K+P LF D+FD + P+
Sbjct: 556 DTLHEMEVKKPSCLFLDDFDVILPQ 580
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 134 bits (325), Expect = 2e-32
Identities = 66/104 (63%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVI- 180
VR VF+KA PCILFFDE DSLAPKRGHDSTGVTDRVVNQLL +DGAEGG +G +I
Sbjct: 810 VRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIIL 869
Query: 181 AATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNL 312
TSR DL+D ALLR GR H+YC P++ R +I+ LT L
Sbjct: 870 GCTSRIDLIDDALLRPGRFDHHVYCGHPEKTERLDIMKVLTNKL 913
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 10 DVFDKADMKRPCILFFDEFDSLAPK 84
D + ++K+P LF D+FD + P+
Sbjct: 556 DTLHEMEVKKPSCLFLDDFDVILPQ 580
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 116 bits (278), Expect = 1e-26
Identities = 61/137 (44%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGH----DSTGVTDRVVNQLLARMDGAEGGARG 171
VRDVFDKA PC+LFFDE DS+A RG D G +DRV+NQ+L MDG
Sbjct: 565 VRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNV 624
Query: 172 PVIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKVV* 351
+I AT+RPD++DPA+LR GRL + IY LPD RH+IL + + +++DL +
Sbjct: 625 FIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAK 684
Query: 352 THRGLHFRDLNSYWYRA 402
G DL RA
Sbjct: 685 NTVGFSGADLTEICQRA 701
Score = 99.5 bits (237), Expect = 9e-22
Identities = 54/128 (42%), Positives = 76/128 (59%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVIA 183
+R F++ + +P ILF DE D++APKR + V R+V+QLL MDG +G + VIA
Sbjct: 292 LRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIA 351
Query: 184 ATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKVV*THRG 363
AT+RP+ +D AL R GR + I +PD GR EIL TKN+ + +VDL ++ G
Sbjct: 352 ATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHG 411
Query: 364 LHFRDLNS 387
DL S
Sbjct: 412 FVGADLAS 419
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 109 bits (262), Expect = 9e-25
Identities = 59/136 (43%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGH---DSTGVTDRVVNQLLARMDGAEGGARGP 174
VRDVFDKA PC+LFFDE DS+A RG D+ G DRV+NQ+L MDG
Sbjct: 564 VRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVF 623
Query: 175 VIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKVV*T 354
+I AT+RPD++DPA+LR GRL + IY LPD R +I + + ++DL +
Sbjct: 624 IIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKN 683
Query: 355 HRGLHFRDLNSYWYRA 402
G DL RA
Sbjct: 684 TVGFSGADLTEICQRA 699
Score = 95.9 bits (228), Expect = 1e-20
Identities = 55/128 (42%), Positives = 73/128 (57%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVIA 183
+R F + + P ILF DE D++APKR V R+V+QLL MDG + A VIA
Sbjct: 291 LRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIA 350
Query: 184 ATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKVV*THRG 363
AT+RP+ +D AL R GR + I +PD GR EIL TKN+ + ++VDL +V G
Sbjct: 351 ATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHG 410
Query: 364 LHFRDLNS 387
DL S
Sbjct: 411 FVGADLAS 418
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 109 bits (262), Expect = 9e-25
Identities = 59/136 (43%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGH---DSTGVTDRVVNQLLARMDGAEGGARGP 174
VRDVFDKA PC+LFFDE DS+A RG D+ G DRV+NQ+L MDG
Sbjct: 564 VRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVF 623
Query: 175 VIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKVV*T 354
+I AT+RPD++DPA+LR GRL + IY LPD R +I + + ++DL +
Sbjct: 624 IIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKN 683
Query: 355 HRGLHFRDLNSYWYRA 402
G DL RA
Sbjct: 684 TVGFSGADLTEICQRA 699
Score = 95.9 bits (228), Expect = 1e-20
Identities = 55/128 (42%), Positives = 73/128 (57%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVIA 183
+R F + + P ILF DE D++APKR V R+V+QLL MDG + A VIA
Sbjct: 291 LRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIA 350
Query: 184 ATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKVV*THRG 363
AT+RP+ +D AL R GR + I +PD GR EIL TKN+ + ++VDL +V G
Sbjct: 351 ATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHG 410
Query: 364 LHFRDLNS 387
DL S
Sbjct: 411 FVGADLAS 418
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 105 bits (251), Expect = 2e-23
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +1
Query: 1 AVRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVI 180
AVR VF +A +PC++FFDE D+L PKR H + R+VNQLL MDG EG + +I
Sbjct: 615 AVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGARLVNQLLTEMDGVEGRQKVFLI 674
Query: 181 AATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLT 315
AT+RPD+VD A+LR GRL K ++ + P R +IL TKN T
Sbjct: 675 GATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGT 719
Score = 52.0 bits (119), Expect = 2e-07
Identities = 46/136 (33%), Positives = 59/136 (43%), Gaps = 30/136 (22%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVV-------------------- 123
+R +FD A PCIL D+ D++AP+R + RVV
Sbjct: 287 IRRLFDTAKQNSPCILILDDIDAIAPRRETAQREMERRVVSQLCSSLDELVLPPREKPLK 346
Query: 124 NQLLARMDGA---------EGGARGPVIAATSRPDLVDPALLRAGRLQKHIYCELPDRWG 276
+QL DG+ GA VI TSRPD VD L RAGR + I +PD
Sbjct: 347 DQLTFGDDGSVAIIGDSPTAAGAGVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETA 406
Query: 277 RHEILPTLTK-NLTVD 321
R +IL + K NL D
Sbjct: 407 REKILEKICKVNLAGD 422
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 105 bits (251), Expect = 2e-23
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +1
Query: 1 AVRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVI 180
AVR VF +A +PC++FFDE D+L PKR H + R+VNQLL MDG EG + +I
Sbjct: 615 AVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGARLVNQLLTEMDGVEGRQKVFLI 674
Query: 181 AATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLT 315
AT+RPD+VD A+LR GRL K ++ + P R +IL TKN T
Sbjct: 675 GATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGT 719
Score = 51.2 bits (117), Expect = 3e-07
Identities = 46/136 (33%), Positives = 58/136 (42%), Gaps = 30/136 (22%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVV-------------------- 123
+R +FD A PCIL D+ D++AP+R + RVV
Sbjct: 287 IRRLFDTAKQNSPCILILDDIDAIAPRRETAQREMERRVVSQLCSSLDELVLPPREKPLK 346
Query: 124 NQLLARMDGA---------EGGARGPVIAATSRPDLVDPALLRAGRLQKHIYCELPDRWG 276
+QL DG+ GA VI TSRPD VD L R GR Q I +PD
Sbjct: 347 DQLTFGDDGSVAIIGDSPTAAGAGVLVIGTTSRPDAVDGRLRRTGRFQNEISLGIPDETA 406
Query: 277 RHEILPTLTK-NLTVD 321
R +IL + K NL D
Sbjct: 407 REKILEKICKVNLAGD 422
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 98.7 bits (235), Expect = 2e-21
Identities = 52/111 (46%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Frame = +1
Query: 1 AVRDVFDKADMKRPCILFFDEFDSLAPKRGHD-STGVTDRVVNQLLARMDGAEGGARGPV 177
A+RD+F +A P I+FFDE D++ RG + S+GV+DRV+ QLL +DG E +R +
Sbjct: 540 AIRDLFSRARQVAPTIVFFDEIDAVGSSRGSEKSSGVSDRVLAQLLTELDGLEKSSRVIL 599
Query: 178 IAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEV 330
+AAT+RPD +D ALLR GRL + IY LP R IL TK + D V
Sbjct: 600 LAATNRPDQLDSALLRPGRLDRAIYVGLPCEVTRRAILEMRTKKMKFDDTV 650
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 87.4 bits (207), Expect = 4e-18
Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 5/119 (4%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGH--DSTGVTDRVVNQLLARMDGAEGG--ARG 171
+R VF++A PC++FFDE DSLAP RG DS GV DR+V+QLLA +D +
Sbjct: 541 LRKVFERAKQASPCVIFFDEIDSLAPNRGRNGDSGGVIDRIVSQLLAELDKLHNSPLTKV 600
Query: 172 PVIAATSRPDLVDPALLRAGRLQKHIYCEL-PDRWGRHEILPTLTKNLTVDQEVDLPKV 345
V+ AT+RPDL+D +L+ GR K + + D + +IL +++ + +++VDL ++
Sbjct: 601 FVMGATNRPDLLDNSLMTPGRFDKLVEVKPGEDVESKTKILEAVSRKMRFEEDVDLREI 659
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 87.4 bits (207), Expect = 4e-18
Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 5/119 (4%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGH--DSTGVTDRVVNQLLARMDGAEGG--ARG 171
+R VF++A PC++FFDE DSLAP RG DS GV DR+V+QLLA +D +
Sbjct: 541 LRKVFERAKQASPCVIFFDEIDSLAPNRGRNGDSGGVIDRIVSQLLAELDKLHNSPLTKV 600
Query: 172 PVIAATSRPDLVDPALLRAGRLQKHIYCEL-PDRWGRHEILPTLTKNLTVDQEVDLPKV 345
V+ AT+RPDL+D +L+ GR K + + D + +IL +++ + +++VDL ++
Sbjct: 601 FVMGATNRPDLLDNSLMTPGRFDKLVEVKPGEDVESKTKILEAVSRKMRFEEDVDLREI 659
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 87.4 bits (207), Expect = 4e-18
Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 5/119 (4%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGH--DSTGVTDRVVNQLLARMDGAEGG--ARG 171
+R VF++A PC++FFDE DSLAP RG DS GV DR+V+QLLA +D +
Sbjct: 541 LRKVFERAKQASPCVIFFDEIDSLAPNRGRNGDSGGVIDRIVSQLLAELDKLHNSPLTKV 600
Query: 172 PVIAATSRPDLVDPALLRAGRLQKHIYCEL-PDRWGRHEILPTLTKNLTVDQEVDLPKV 345
V+ AT+RPDL+D +L+ GR K + + D + +IL +++ + +++VDL ++
Sbjct: 601 FVMGATNRPDLLDNSLMTPGRFDKLVEVKPGEDVESKTKILEAVSRKMRFEEDVDLREI 659
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 86.2 bits (204), Expect = 9e-18
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGV---TDRVVNQLLARMDGAEGGARGP 174
VRDVF A P I+F DE D++A KR TG R++ +LL +MDG +
Sbjct: 243 VRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVK 302
Query: 175 VIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKVV*T 354
VI AT+R D +DPALLR GRL + I LPDR + + T+ + + +VDL V
Sbjct: 303 VIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVAR 362
Query: 355 HRGLHFRDLNS 387
+ D+NS
Sbjct: 363 PDKISGADINS 373
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 85.4 bits (202), Expect = 2e-17
Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVT---DRVVNQLLARMDGAEGGARGP 174
+R++F+ A +PCI+F DE D++ +R + T R + +LL ++DG + +
Sbjct: 224 IREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVK 283
Query: 175 VIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKVV*T 354
VI AT+RPD +DPALLR GRL + I LP+ R EIL + +T E+D VV
Sbjct: 284 VIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKL 343
Query: 355 HRGLHFRDLNS 387
G DL +
Sbjct: 344 SDGFSAADLRN 354
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 85.4 bits (202), Expect = 2e-17
Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVT---DRVVNQLLARMDGAEGGARGP 174
+R++F+ A +PCI+F DE D++ +R + T R + +LL ++DG + +
Sbjct: 232 IREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVK 291
Query: 175 VIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKVV*T 354
VI AT+RPD +DPALLR GRL + I LP+ R EIL + +T E+D VV
Sbjct: 292 VIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKL 351
Query: 355 HRGLHFRDLNS 387
G DL +
Sbjct: 352 SDGFSAADLRN 362
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 82.6 bits (195), Expect = 1e-16
Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTG---VTDRVVNQLLARMDGAEGGARGP 174
VR++F+ A K+ C++FFDE D++ R D G R + +L+ ++DG +
Sbjct: 259 VRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIK 318
Query: 175 VIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEV 330
V+ AT+RPD +DPAL+R GRL + + LPD GR IL K ++V++++
Sbjct: 319 VLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDI 370
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 81.4 bits (192), Expect = 3e-16
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVIA 183
+R +FD+A RP I+FFDE D LAP R + +V+ LLA MDG +G VI
Sbjct: 478 LRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIG 537
Query: 184 ATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEIL 291
AT+R D +DPAL R GR + + LPD R +IL
Sbjct: 538 ATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQIL 573
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 81.4 bits (192), Expect = 3e-16
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVIA 183
+R +FD+A RP I+FFDE D LAP R + +V+ LLA MDG +G VI
Sbjct: 476 LRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIG 535
Query: 184 ATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEIL 291
AT+R D +DPAL R GR + + LPD R +IL
Sbjct: 536 ATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQIL 571
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 81.4 bits (192), Expect = 3e-16
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVIA 183
+R +FD+A RP I+FFDE D LAP R + +V+ LLA MDG +G VI
Sbjct: 478 LRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIG 537
Query: 184 ATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEIL 291
AT+R D +DPAL R GR + + LPD R +IL
Sbjct: 538 ATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQIL 573
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 81.4 bits (192), Expect = 3e-16
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVIA 183
+R +FD+A RP I+FFDE D LAP R + +V+ LLA MDG +G VI
Sbjct: 478 LRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIG 537
Query: 184 ATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEIL 291
AT+R D +DPAL R GR + + LPD R +IL
Sbjct: 538 ATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQIL 573
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 81.4 bits (192), Expect = 3e-16
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVIA 183
+R +FD+A RP I+FFDE D LAP R + +V+ LLA MDG +G VI
Sbjct: 476 LRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIG 535
Query: 184 ATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEIL 291
AT+R D +DPAL R GR + + LPD R +IL
Sbjct: 536 ATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQIL 571
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 81.4 bits (192), Expect = 3e-16
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVIA 183
+R +FD+A RP I+FFDE D LAP R + +V+ LLA MDG +G VI
Sbjct: 478 LRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIG 537
Query: 184 ATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEIL 291
AT+R D +DPAL R GR + + LPD R +IL
Sbjct: 538 ATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQIL 573
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 81.4 bits (192), Expect = 3e-16
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVIA 183
+R +FD+A RP I+FFDE D LAP R + +V+ LLA MDG +G VI
Sbjct: 478 LRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIG 537
Query: 184 ATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEIL 291
AT+R D +DPAL R GR + + LPD R +IL
Sbjct: 538 ATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQIL 573
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 80.2 bits (189), Expect = 6e-16
Identities = 48/116 (41%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTG-VTDRVVNQLLARMDGAEGGARGPVI 180
VRD+FDKA + PCI+F DE DS+ KR +S ++ +NQLL+ MDG VI
Sbjct: 282 VRDLFDKAKARAPCIIFIDEIDSVGSKRVSNSIHPYANQTINQLLSEMDGFTRNEGIIVI 341
Query: 181 AATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKVV 348
AAT+R D +D ALLR GR + PD GR +I + +D PKV+
Sbjct: 342 AATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGGID-PKVL 396
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 74.5 bits (175), Expect = 3e-14
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Frame = +1
Query: 46 ILFFDEFDSLAPKRGH--DSTGVTDRVVNQLLARMDGAEGGARGPVIAATSRPDLVDPAL 219
I+ FDE D++ +RG S+ V D VVNQLL++MDG E VI T+R D++D AL
Sbjct: 401 IIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEAL 460
Query: 220 LRAGRLQKHIYCELPDRWGRHEILPTLTKNL----TVDQEVDLPKV 345
LR GRL+ + LPD GR +IL T + +D VDL +
Sbjct: 461 LRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDI 506
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 74.5 bits (175), Expect = 3e-14
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Frame = +1
Query: 46 ILFFDEFDSLAPKRGH--DSTGVTDRVVNQLLARMDGAEGGARGPVIAATSRPDLVDPAL 219
I+ FDE D++ +RG S+ V D VVNQLL++MDG E VI T+R D++D AL
Sbjct: 401 IIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEAL 460
Query: 220 LRAGRLQKHIYCELPDRWGRHEILPTLTKNL----TVDQEVDLPKV 345
LR GRL+ + LPD GR +IL T + +D VDL +
Sbjct: 461 LRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDI 506
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 74.5 bits (175), Expect = 3e-14
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Frame = +1
Query: 46 ILFFDEFDSLAPKRGH--DSTGVTDRVVNQLLARMDGAEGGARGPVIAATSRPDLVDPAL 219
I+ FDE D++ +RG S+ V D VVNQLL++MDG E VI T+R D++D AL
Sbjct: 335 IIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEAL 394
Query: 220 LRAGRLQKHIYCELPDRWGRHEILPTLTKNL----TVDQEVDLPKV 345
LR GRL+ + LPD GR +IL T + +D VDL +
Sbjct: 395 LRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDI 440
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 74.5 bits (175), Expect = 3e-14
Identities = 44/100 (44%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDST----GVTDRVVNQLLARMDGAEGGARG 171
VRD+F A PCILF DE D++ KRG + +NQLL MDG
Sbjct: 374 VRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGMGGHSEQENTLNQLLVEMDGFTTDESS 433
Query: 172 P-VIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEI 288
VIAAT+R D++D ALLR GR + IY +PD GR I
Sbjct: 434 VIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIKGRASI 473
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 74.1 bits (174), Expect = 4e-14
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVN----QLLARMDGAEGGARG 171
VRD F A K P I+F DE D++ KR DS DR V +LL ++DG +
Sbjct: 259 VRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGDREVQRTMLELLNQLDGFQPNDDI 317
Query: 172 PVIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKV 345
VIAAT+R D++DPALLR+GRL + I P+ R I+ ++ + V+++V+ ++
Sbjct: 318 KVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEEL 375
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 72.5 bits (170), Expect = 1e-13
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTG---VTDRVVNQLLARMDGAEGGARGP 174
VR++F A P I+F DE DS+ R S+G R + +LL ++DG E
Sbjct: 241 VRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIK 300
Query: 175 VIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKV 345
VI AT+R D++DPALLR GR+ + I PD R +IL ++ + + + +++ K+
Sbjct: 301 VIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKI 357
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 72.5 bits (170), Expect = 1e-13
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDS---------TGVTDRVVNQLLARMDGAE 156
+R +F +A + PCI++ DE D++ KR + +G ++ +NQLL MDG
Sbjct: 366 IRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGGGFGGGSGEEEQTLNQLLVEMDGMG 425
Query: 157 GGARGPVIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVD 321
G V+A+T+R D++D ALLR GR +HI +LP R ++ + + +D
Sbjct: 426 SGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMFELYMRKIKLD 480
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 72.5 bits (170), Expect = 1e-13
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDS---------TGVTDRVVNQLLARMDGAE 156
+R +F +A + PCI++ DE D++ KR + +G ++ +NQLL MDG
Sbjct: 366 IRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGGGFGGGSGEEEQTLNQLLVEMDGMG 425
Query: 157 GGARGPVIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVD 321
G V+A+T+R D++D ALLR GR +HI +LP R ++ + + +D
Sbjct: 426 SGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMFELYMRKIKLD 480
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 70.9 bits (166), Expect = 4e-13
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTG---VTDRVVNQLLARMDGAEGGARGP 174
VR++F A+ P I+F DE D++ KR ++G R + +LL ++DG +
Sbjct: 270 VRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVK 329
Query: 175 VIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKVV 348
V+ AT+R + +DPAL+R GR+ + I LPD + I T +T+ +EV+L + +
Sbjct: 330 VLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFI 387
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 68.9 bits (161), Expect = 2e-12
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTG---VTDRVVNQLLARMDGAEGGARGP 174
VR +F A + P I+F DE D++ KR S+ R + +LL ++DG E
Sbjct: 265 VRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVK 324
Query: 175 VIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKVV 348
+I AT+R D +DPAL+R GR+ + I PD R +I T +T+ + V V+
Sbjct: 325 IIMATNRIDSLDPALIRPGRIDRKIELPKPDEKTRQKIFTIHTSGMTIQKAVTYENVL 382
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 67.3 bits (157), Expect = 5e-12
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTG---VTDRVVNQLLARMDGAEGGARGP 174
VR++F A P I+F DE DS+ R S G R + +LL ++DG E
Sbjct: 236 VRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIK 295
Query: 175 VIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKV 345
VI AT+R D++D ALLR GR+ + I PD R +IL ++ + + + + + K+
Sbjct: 296 VIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKI 352
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 67.3 bits (157), Expect = 5e-12
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTG---VTDRVVNQLLARMDGAEGGARGP 174
VR++F A P I+F DE DS+ R S G R + +LL ++DG E
Sbjct: 257 VRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIK 316
Query: 175 VIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVDLPKV 345
VI AT+R D++D ALLR GR+ + I PD R +IL ++ + + + + + K+
Sbjct: 317 VIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKI 373
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 62.5 bits (145), Expect = 1e-10
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGA--RGPV 177
+R +F A +P I+F DE DS+ +R V+ R+ + L + DGA A R V
Sbjct: 259 IRGLFQIARNAQPSIIFIDEIDSILCERSEKDAEVSRRMKTEFLVQFDGATSSADDRILV 318
Query: 178 IAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEIL-PTLTKNLTVD 321
I AT+RP +D A+LR R K I LPD R E++ TL K+ +D
Sbjct: 319 IGATNRPHELDDAVLR--RFPKRIMLNLPDEEARKELITKTLKKHNMMD 365
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 57.6 bits (133), Expect = 4e-09
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGG--ARGPV 177
VR +F A +K P ++F DE DSL R + R+ + L ++DG R V
Sbjct: 397 VRALFSVARLKLPSVIFIDEIDSLLSSRSESEHESSRRIKTEFLVQLDGVNTAPDERLLV 456
Query: 178 IAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTL 300
+ AT+RP +D A R R QK +Y LP+ R +I+ L
Sbjct: 457 LGATNRPQELDEAARR--RFQKRLYIALPEPESRTQIVQNL 495
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 53.2 bits (122), Expect = 8e-08
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDST-GVTDRVVNQLLARMDGAEG---GARG 171
VR +F+ A P I+F DE D+L +RG+ + RV ++ L +MDG++ R
Sbjct: 274 VRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRV 333
Query: 172 PVIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVD 333
V+AAT+ P +D AL R R +K I+ LPD R +++ + E++
Sbjct: 334 FVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEIN 385
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 53.2 bits (122), Expect = 8e-08
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDST-GVTDRVVNQLLARMDGAEG---GARG 171
VR +F+ A P I+F DE D+L +RG+ + RV ++ L +MDG++ R
Sbjct: 274 VRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRV 333
Query: 172 PVIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVD 333
V+AAT+ P +D AL R R +K I+ LPD R +++ + E++
Sbjct: 334 FVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEIN 385
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 53.2 bits (122), Expect = 8e-08
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDST-GVTDRVVNQLLARMDGAEG---GARG 171
VR +F+ A P I+F DE D+L +RG+ + RV ++ L +MDG++ R
Sbjct: 274 VRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRV 333
Query: 172 PVIAATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEILPTLTKNLTVDQEVD 333
V+AAT+ P +D AL R R +K I+ LPD R +++ + E++
Sbjct: 334 FVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEIN 385
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 52.0 bits (119), Expect = 2e-07
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPKRGHDSTGVTDRVVNQLLARMDGAEGGARG-PVI 180
V+++F A +P I+F DE DSL R + + R+ + + +M G G V+
Sbjct: 200 VKNLFALAREHKPSIIFIDEIDSLCSARSDNESESARRIKTEFMVQMQGVGLNNDGILVL 259
Query: 181 AATSRPDLVDPALLRAGRLQKHIYCELPDRWGRHEI 288
AT+ P ++D A+ R R +K IY LPD R E+
Sbjct: 260 GATNIPWILDSAIRR--RFEKRIYIPLPDIHARKEM 293
>AC132211-4|AAN01432.2| 238|Caenorhabditis elegans Hypothetical
protein Y108F1.1 protein.
Length = 238
Score = 50.4 bits (115), Expect = 6e-07
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 100 TGVTDRVVNQLLARMDG-AEGGARGPVIAATSRPDLVDPALLRAGRLQKHIYCELPDRWG 276
+G ++ +NQLL MD G V+A+T+R D++D ALLR GR +HI +LP
Sbjct: 52 SGEEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLE 111
Query: 277 RHEILPTLTKNLTVD 321
R ++ + + +D
Sbjct: 112 RKDMFELYMRKIKLD 126
>AC024789-1|AAK85500.1| 238|Caenorhabditis elegans Hypothetical
protein Y47C4A.1 protein.
Length = 238
Score = 50.4 bits (115), Expect = 6e-07
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 100 TGVTDRVVNQLLARMDG-AEGGARGPVIAATSRPDLVDPALLRAGRLQKHIYCELPDRWG 276
+G ++ +NQLL MD G V+A+T+R D++D ALLR GR +HI +LP
Sbjct: 52 SGEEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLE 111
Query: 277 RHEILPTLTKNLTVD 321
R ++ + + +D
Sbjct: 112 RKDMFELYMRKIKLD 126
>AF016417-3|AAB65281.1| 457|Caenorhabditis elegans Hypothetical
protein F17A9.4 protein.
Length = 457
Score = 31.9 bits (69), Expect = 0.21
Identities = 22/83 (26%), Positives = 35/83 (42%)
Frame = +1
Query: 73 LAPKRGHDSTGVTDRVVNQLLARMDGAEGGARGPVIAATSRPDLVDPALLRAGRLQKHIY 252
+A R D+ V+ +++ + L +G R A T R DP + L +
Sbjct: 1 MAASRFCDNLTVSSKILGEQLNFRNGKTAQNRFLKAALTERVSTYDPENPKKHGLPTNFI 60
Query: 253 CELPDRWGRHEILPTLTKNLTVD 321
L D+WG + LT N+ VD
Sbjct: 61 LNLYDKWGHGKFGTILTGNVLVD 83
>AF024493-10|AAK68346.1| 232|Caenorhabditis elegans C. elegans
NFYC-1 protein protein.
Length = 232
Score = 29.5 bits (63), Expect = 1.1
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = -2
Query: 240 LKSAGSQQRRVHQVRPRCGRYNGTPGPAL--GAVHPRQQLVHHSVRHPGRVVTTFGRETV 67
+++ G+ Q V P + P++ GAVHP L+HH+ P + + T
Sbjct: 24 IQNDGTNQSEVFMEHPYTPNMHPINMPSIVEGAVHPYNNLIHHNDAIPPAKYASMRQMTE 83
Query: 66 EFVEEQYARTLHVRFVEDIPN 4
+F E+ + + ED+ N
Sbjct: 84 DFWREKKQKMTEIS-EEDMLN 103
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 27.1 bits (57), Expect = 6.0
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 79 PKRGHDSTGVTDRVV-NQLLARMDGAEGGARGPVIAATSRPDLVDPALLRAGRLQKHIY 252
P H + RV + LL +DG T+ + +DPAL+R GR+ + Y
Sbjct: 268 PMSNHPAYQGLSRVTFSGLLNALDGVACAEERLTFMTTNYVERLDPALIRPGRVDRKQY 326
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 27.1 bits (57), Expect = 6.0
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 79 PKRGHDSTGVTDRVV-NQLLARMDGAEGGARGPVIAATSRPDLVDPALLRAGRLQKHIY 252
P H + RV + LL +DG T+ + +DPAL+R GR+ + Y
Sbjct: 314 PMSNHPAYQGLSRVTFSGLLNALDGVACAEERLTFMTTNYVERLDPALIRPGRVDRKQY 372
>AF039718-3|AAB96744.1| 329|Caenorhabditis elegans Hypothetical
protein T12F5.2 protein.
Length = 329
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 4 VRDVFDKADMKRPCILFFDEFDSLAPK 84
+RDV K +MK C + +EFD++ PK
Sbjct: 15 IRDV--KFNMKPTCSICMEEFDAIVPK 39
>Z54235-2|CAA90972.2| 371|Caenorhabditis elegans Hypothetical
protein C09G9.2 protein.
Length = 371
Score = 26.6 bits (56), Expect = 8.0
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1
Query: 133 AAGSPLCPSPRSSRDHVW 80
A+G+P+ PRS++D +W
Sbjct: 296 ASGAPIAVGPRSTKDTIW 313
>U23172-3|AAC46526.1| 547|Caenorhabditis elegans Hypothetical
protein F25B5.5 protein.
Length = 547
Score = 26.6 bits (56), Expect = 8.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 75 ETVEFVEEQYARTLHVRFVEDI 10
ET+E +E Y R L++R V+DI
Sbjct: 371 ETLERMERGYTRDLYLRLVDDI 392
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,292,513
Number of Sequences: 27780
Number of extensions: 214529
Number of successful extensions: 729
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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