Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2459
         (442 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   0.65 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.0  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   3.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   3.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   6.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   6.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.9  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 338 RKLSERTEGYTSAILIPTGTGQLTKLK 418
           ++ S RT+ YT  I++  GTG    LK
Sbjct: 297 KETSTRTDAYTVEIVLEPGTGINVTLK 323


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 141 PRQQLVHHSVRHP 103
           P QQL HH   HP
Sbjct: 810 PHQQLHHHQSTHP 822



 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 148  GAEGGARGPVIAATSRPDLVDPALLRAGR 234
            G  GG +   +  + +P + DP+  + GR
Sbjct: 968  GGMGGCQPGGVVQSQQPIMTDPSPFKRGR 996


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 297 CWKYFVSAPPIGQFAV 250
           C + F   PP+G+FAV
Sbjct: 411 CVEAFQEFPPLGRFAV 426


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 297 CWKYFVSAPPIGQFAV 250
           C + F   PP+G+FAV
Sbjct: 411 CAEAFQEFPPLGRFAV 426


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 347 TTFGRSTSWSTVRFFVN 297
           T FGR   W+++ F  N
Sbjct: 539 TNFGREDFWNSINFNEN 555


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 301 TKNLTVDQEVDLPKVV*THRGLHFRDLNSYW 393
           +++L   Q  +L + + TH GL  R   S W
Sbjct: 306 SRDLCDVQRYNLLETIATHMGLDTRTSTSLW 336


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 347 TTFGRSTSWSTVRFFVN 297
           T FGR   W+++ F  N
Sbjct: 539 TNFGREDFWNSINFNEN 555


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 124 SPLCPSPRSS 95
           S LCP+PRS+
Sbjct: 379 SQLCPTPRST 388


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,009
Number of Sequences: 438
Number of extensions: 2390
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)