Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2458
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.2  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   6.8  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   9.0  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.0  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 349 ILRWRLCVDHIHLP 308
           IL W LC  H+ LP
Sbjct: 781 ILFWYLCAGHVRLP 794


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 349 ILRWRLCVDHIHLP 308
           IL W LC  H+ LP
Sbjct: 819 ILFWYLCAGHVRLP 832


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 116 FCIFKYYFPNSLLLTQYEARGWPGCSY 36
           F +F Y  P S    QY +R W G  +
Sbjct: 616 FQLFLYVSPVSSEYNQYNSRIWGGYKF 642


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 116 FCIFKYYFPNSLLLTQYEARGWPGCSY 36
           F +F Y  P S    QY +R W G  +
Sbjct: 616 FQLFLYVSPVSSEYNQYNSRIWGGYKF 642


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 107 KYKNIPEIMFKMDKVENTQHGGQGRATK 190
           +YK I +I+ +M+K+     GGQ +  K
Sbjct: 258 EYKKIQQILIRMNKLCIQTIGGQIKPRK 285


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 693 IEHLGQVSPGFCIRFFFSMYW 631
           I  L +V   F + F+F  +W
Sbjct: 47  ISSLSEVKMDFTLDFYFRQFW 67


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -1

Query: 136 EHNFRDIFVFLNIIFQIPYF*HNMKPEDGRVVAI 35
           E++ R++   LN+I +  YF ++   E+ R  AI
Sbjct: 22  ENSPRNLEKSLNVIHEWKYFDYDFGSEERRQAAI 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,761
Number of Sequences: 438
Number of extensions: 3967
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)