Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2455
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81033-2|CAB02725.1|  263|Caenorhabditis elegans Hypothetical pr...    75   3e-14
AJ011777-1|CAA09770.1|  263|Caenorhabditis elegans FOG-3 protein...    75   3e-14
U97405-3|AAB53008.1|  192|Caenorhabditis elegans Hypothetical pr...    32   0.41 
Z68118-4|CAD18873.1|  235|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z68118-3|CAA92190.2|  280|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U40798-2|AAQ01525.2|  389|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81096-8|CAD54149.2|  922|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z81096-6|CAJ80827.1|  691|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z81096-4|CAB54264.2|  689|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z81096-3|CAB54265.2|  747|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z78065-11|CAD54155.2|  922|Caenorhabditis elegans Hypothetical p...    28   6.7  
Z78065-10|CAJ80826.1|  691|Caenorhabditis elegans Hypothetical p...    28   6.7  
Z78065-7|CAB54297.2|  689|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z78065-6|CAB54298.2|  747|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z81033-2|CAB02725.1|  263|Caenorhabditis elegans Hypothetical
           protein C03C11.2 protein.
          Length = 263

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 42/116 (36%), Positives = 58/116 (50%)
 Frame = +1

Query: 106 MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDRPCRGSAFRCLKT 285
           M+ EV+  +NFV  YL+  +PRR V IFG EL   L   F   W    P  G   R + T
Sbjct: 1   MYTEVRELVNFVCRYLFGHIPRRPVGIFGAELGNYLVSHFSSTWDVHHPKNGEMKRMINT 60

Query: 286 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWVDPGEVSYRIGEKGAVKVLFSSD 453
              L      +A E+GVP  DVL  LP ++ ++ +PG V  R+ E G    ++  D
Sbjct: 61  TTSL--CFASSAEEAGVPPSDVLRLLPTNMIIFANPGHVFVRLSENGIETPIWIGD 114


>AJ011777-1|CAA09770.1|  263|Caenorhabditis elegans FOG-3 protein
           protein.
          Length = 263

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 42/116 (36%), Positives = 58/116 (50%)
 Frame = +1

Query: 106 MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDRPCRGSAFRCLKT 285
           M+ EV+  +NFV  YL+  +PRR V IFG EL   L   F   W    P  G   R + T
Sbjct: 1   MYTEVRELVNFVCRYLFGHIPRRPVGIFGAELGNYLVSHFSSTWDVHHPKNGEMKRMINT 60

Query: 286 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWVDPGEVSYRIGEKGAVKVLFSSD 453
              L      +A E+GVP  DVL  LP ++ ++ +PG V  R+ E G    ++  D
Sbjct: 61  TTSL--CFASSAEEAGVPPSDVLRLLPTNMIIFANPGHVFVRLSENGIETPIWIGD 114


>U97405-3|AAB53008.1|  192|Caenorhabditis elegans Hypothetical
           protein T09B4.6 protein.
          Length = 192

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 24/99 (24%), Positives = 45/99 (45%)
 Frame = +1

Query: 106 MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDRPCRGSAFRCLKT 285
           M +EVQ A+ F+ ++++ ++PR RV  F   L   L +         + C       +  
Sbjct: 1   MILEVQEAVQFLSTFMFGRIPRSRVKSFCGHLSSLLSEAIDA-----KRCVDRYDLIVFA 55

Query: 286 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWVDPGEV 402
            G  D  + +AAR + V + ++ E +   L + +  G V
Sbjct: 56  DGRSDDTIVQAARRAYVHLGELQECMNNGLIMEIMNGRV 94


>Z68118-4|CAD18873.1|  235|Caenorhabditis elegans Hypothetical
           protein R01E6.3b protein.
          Length = 235

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = +1

Query: 379 VWVDPGEVSYRIGEKGAVKVLFSSDERAADERTDREVTRAFN 504
           ++ +P EVS+  G+   ++ +  ++ RA  +R DRE+  +FN
Sbjct: 195 LFTEPVEVSF--GQLNVLRNIIPANHRACQDRCDREIRSSFN 234


>Z68118-3|CAA92190.2|  280|Caenorhabditis elegans Hypothetical
           protein R01E6.3a protein.
          Length = 280

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = +1

Query: 379 VWVDPGEVSYRIGEKGAVKVLFSSDERAADERTDREVTRAFN 504
           ++ +P EVS+  G+   ++ +  ++ RA  +R DRE+  +FN
Sbjct: 240 LFTEPVEVSF--GQLNVLRNIIPANHRACQDRCDREIRSSFN 279


>U40798-2|AAQ01525.2|  389|Caenorhabditis elegans Hypothetical
           protein R13A1.9 protein.
          Length = 389

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = +1

Query: 85  CSLVLPKMHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDR 249
           C+ ++ +MHI +  A +F +   + K+    +N FGE+      D F G+W  D+
Sbjct: 188 CNSIVWRMHIPLIPATSFFLYLGWMKVAEALLNPFGED-----DDDFEGNWVIDK 237


>Z81096-8|CAD54149.2|  922|Caenorhabditis elegans Hypothetical
           protein T09E8.1c protein.
          Length = 922

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 31  LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 141
           L N  SP+G   +FSP D S+  P  H+  +V ++ V
Sbjct: 376 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 412


>Z81096-6|CAJ80827.1|  691|Caenorhabditis elegans Hypothetical
           protein T09E8.1f protein.
          Length = 691

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 31  LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 141
           L N  SP+G   +FSP D S+  P  H+  +V ++ V
Sbjct: 145 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 181


>Z81096-4|CAB54264.2|  689|Caenorhabditis elegans Hypothetical
           protein T09E8.1b protein.
          Length = 689

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 31  LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 141
           L N  SP+G   +FSP D S+  P  H+  +V ++ V
Sbjct: 143 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 179


>Z81096-3|CAB54265.2|  747|Caenorhabditis elegans Hypothetical
           protein T09E8.1a protein.
          Length = 747

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 31  LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 141
           L N  SP+G   +FSP D S+  P  H+  +V ++ V
Sbjct: 201 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 237


>Z78065-11|CAD54155.2|  922|Caenorhabditis elegans Hypothetical
           protein T09E8.1c protein.
          Length = 922

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 31  LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 141
           L N  SP+G   +FSP D S+  P  H+  +V ++ V
Sbjct: 376 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 412


>Z78065-10|CAJ80826.1|  691|Caenorhabditis elegans Hypothetical
           protein T09E8.1f protein.
          Length = 691

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 31  LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 141
           L N  SP+G   +FSP D S+  P  H+  +V ++ V
Sbjct: 145 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 181


>Z78065-7|CAB54297.2|  689|Caenorhabditis elegans Hypothetical
           protein T09E8.1b protein.
          Length = 689

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 31  LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 141
           L N  SP+G   +FSP D S+  P  H+  +V ++ V
Sbjct: 143 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 179


>Z78065-6|CAB54298.2|  747|Caenorhabditis elegans Hypothetical
           protein T09E8.1a protein.
          Length = 747

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 31  LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 141
           L N  SP+G   +FSP D S+  P  H+  +V ++ V
Sbjct: 201 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 237


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 634  CANVAVVKVSGCARNEGRRKRRPRALAVTAPQQAPL 527
            C+N+ + K+S    NE RRK RP     T+P  A +
Sbjct: 1432 CSNINIAKLSDTEYNEYRRKCRP-TRKTTSPDCADI 1466


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,677,524
Number of Sequences: 27780
Number of extensions: 353864
Number of successful extensions: 791
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)