Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2450
(611 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 138 6e-34
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 103 3e-23
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 99 6e-22
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 85 6e-18
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 77 2e-15
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 59 6e-10
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 56 3e-09
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 43 3e-05
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 35 0.011
SPBC83.05 |||mitochondrial RNA-binding protein |Schizosaccharomy... 26 3.7
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 4.9
SPBC16A3.10 |||membrane bound O-acyltransferase, MBOAT |Schizosa... 25 8.6
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 138 bits (334), Expect = 6e-34
Identities = 69/125 (55%), Positives = 82/125 (65%)
Frame = +2
Query: 212 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 391
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVI 80
Query: 392 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIFSSHL 571
NFMIQ +SIYG RF DENF+L H G LSMANAG D+NG F +
Sbjct: 81 PNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFIT-T 139
Query: 572 LKHPW 586
+K PW
Sbjct: 140 VKTPW 144
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +3
Query: 546 GSQFFHHTC*NTPGLDGRHVCF 611
GSQFF T TP LDG HV F
Sbjct: 132 GSQFFITTV-KTPWLDGHHVVF 152
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 103 bits (246), Expect = 3e-23
Identities = 55/123 (44%), Positives = 67/123 (54%)
Frame = +2
Query: 242 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 421
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 422 XXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIFSSHLLKHPWFRWQT 601
+SIYGE+F DENF LKH G LSMANAG +TNG F + ++ PW +
Sbjct: 66 TRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVT-PWLDGKH 124
Query: 602 CLF 610
+F
Sbjct: 125 VVF 127
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 98.7 bits (235), Expect = 6e-22
Identities = 57/113 (50%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 400
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 401 MIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
M+Q SIYGE+FEDENF+LKH LSMANAG +TNG F
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFF 116
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 546 GSQFFHHTC*NTPGLDGRHVCF 611
GSQFF T TP LDG+HV F
Sbjct: 112 GSQFFITTV-PTPHLDGKHVVF 132
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 85.4 bits (202), Expect = 6e-18
Identities = 54/117 (46%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Frame = +2
Query: 236 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 391
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 392 KNFMIQXXXXXXXXXXXXRSIYGER-FEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
+ FMIQ +I+ R F DENF LKH G LSMANAGKD+NG F
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFF 121
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 77.4 bits (182), Expect = 2e-15
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Frame = +2
Query: 266 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 445
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGT 65
Query: 446 RSIYGERFEDE-NFQLKHYGAGWLSMANAGKDTNGISIFSSHLLKHPWFRWQTCLF 610
SIYG++F+DE + L H GAG LSMANAG +TN F + L PW + +F
Sbjct: 66 -SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFIT-LAPTPWLDGKHTIF 119
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 58.8 bits (136), Expect = 6e-10
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Frame = +2
Query: 272 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 451
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQ-GGDPLGDGTGGES 519
Query: 452 IYGERFEDE-NFQLKHYGAGWLSMANAGKDTNGISIFSSHLLKHPWFRWQTCLF 610
I+ + FEDE + LKH +SMAN+G +TNG F + L PW + +F
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLT-PWLDGKHTIF 572
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 56.4 bits (130), Expect = 3e-09
Identities = 40/99 (40%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +2
Query: 266 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 445
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQGGDPSGTGRGG- 338
Query: 446 RSIYGERFEDENFQ-LKHYGAGWLSMANAGKDTNGISIF 559
+SI+G+ F+DE LKH G +SMAN GK+TNG F
Sbjct: 339 QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFF 377
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 43.2 bits (97), Expect = 3e-05
Identities = 35/97 (36%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +2
Query: 272 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 451
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQ-GGDPTGTGMGGES 77
Query: 452 IYGERFEDENF-QLKHYGAGWLSMANAGKDTNGISIF 559
IYGE F E +L+ G + MA + N F
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFF 114
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 34.7 bits (76), Expect = 0.011
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Frame = +2
Query: 260 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 439
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 440 XXRSIY-----GERFEDENF--QLKHYGAGWLSMANA 529
R ++ G RF F L H G +SM+ A
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTA 99
>SPBC83.05 |||mitochondrial RNA-binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 132 SLVRFPCYFYKIRFECLFFQN 70
+LV P YFY R+ L FQN
Sbjct: 54 NLVNTPTYFYIQRYTALLFQN 74
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -2
Query: 448 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 296
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPBC16A3.10 |||membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 521 P*ITNQLHSASAGSFHLQNVHHIY 450
P I N L S S G F+L VHH+Y
Sbjct: 46 PWIRN-LFSISIGLFYLIGVHHLY 68
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,536,521
Number of Sequences: 5004
Number of extensions: 52030
Number of successful extensions: 154
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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