Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2450
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical pr... 180 7e-46
U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin iso... 175 2e-44
U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin pro... 168 3e-42
U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin pro... 168 3e-42
U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1 p... 107 6e-24
AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical ... 107 6e-24
Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical pr... 105 3e-23
U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin iso... 105 3e-23
Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical pr... 101 4e-22
U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin iso... 101 4e-22
AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical ... 101 4e-22
AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical ... 100 2e-21
U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin pro... 97 7e-21
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 95 5e-20
U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin iso... 93 1e-19
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 83 2e-16
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 83 2e-16
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 83 2e-16
U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin pro... 79 2e-15
Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical pr... 75 3e-14
Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical p... 75 3e-14
U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin iso... 75 3e-14
U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin iso... 75 3e-14
AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical... 66 1e-11
AF393636-1|AAM19304.1| 222|Caenorhabditis elegans cyclophilin-1... 66 1e-11
AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical ... 64 8e-11
U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical pr... 61 5e-10
Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical pr... 60 9e-10
Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical pr... 60 9e-10
U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin iso... 60 9e-10
AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin M... 60 9e-10
U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin iso... 57 9e-09
U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin pro... 57 9e-09
U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin pro... 57 9e-09
U28943-7|AAK68294.1| 315|Caenorhabditis elegans Serpentine rece... 29 2.6
AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical ... 28 4.6
AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical ... 28 4.6
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 28 6.0
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 28 6.0
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 28 6.0
Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical pr... 27 8.0
U22833-4|AAA64324.2| 181|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical
protein F31C3.1 protein.
Length = 204
Score = 180 bits (438), Expect = 7e-46
Identities = 91/156 (58%), Positives = 107/156 (68%)
Frame = +2
Query: 143 MGTLTMALGILVFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTE 322
M +L + +L A A+ D+ KGPKVT KV FDM+IG IG IVIGLFGKTVPKT
Sbjct: 1 MKSLLVVAAVLAVGALAQGDDA-KGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTAT 59
Query: 323 NFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYG 502
NF +LA+KP+GEGY GSKFHRVI +FMIQ RSIYGE+F DENF+LKHYG
Sbjct: 60 NFIELAKKPKGEGYPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYG 119
Query: 503 AGWLSMANAGKDTNGISIFSSHLLKHPWFRWQTCLF 610
AGWLSMANAG DTNG F + +K PW + +F
Sbjct: 120 AGWLSMANAGADTNGSQFFIT-TVKTPWLDGRHVVF 154
>U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin
isoform 5 protein.
Length = 204
Score = 175 bits (426), Expect = 2e-44
Identities = 85/133 (63%), Positives = 96/133 (72%)
Frame = +2
Query: 212 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 391
KGPKVT KV FDM+IG IG IVIGLFGKTVPKT NF +LA+KP+GEGY GSKFHRVI
Sbjct: 23 KGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKFHRVI 82
Query: 392 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIFSSHL 571
+FMIQ RSIYGE+F DENF+LKHYGAGWLSMANAG DTNG F +
Sbjct: 83 ADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFIT-T 141
Query: 572 LKHPWFRWQTCLF 610
+K PW + +F
Sbjct: 142 VKTPWLDGRHVVF 154
>U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin
protein.
Length = 201
Score = 168 bits (408), Expect = 3e-42
Identities = 83/136 (61%), Positives = 97/136 (71%)
Frame = +2
Query: 152 LTMALGILVFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFF 331
++ AL V A S E +GP+VT KV FDM+IG +G IVIGLFG+ VPKT +NF
Sbjct: 1 MSRALLFFVLAILALSAEA-RGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFV 59
Query: 332 QLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGW 511
+LAQ+ EGEGY GSKFHRVI+NFMIQ RSIYGERFEDENF+L+HYG GW
Sbjct: 60 ELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGW 119
Query: 512 LSMANAGKDTNGISIF 559
LSMANAG+DTNG F
Sbjct: 120 LSMANAGEDTNGSQFF 135
>U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin
protein 6 protein.
Length = 201
Score = 168 bits (408), Expect = 3e-42
Identities = 83/136 (61%), Positives = 97/136 (71%)
Frame = +2
Query: 152 LTMALGILVFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFF 331
++ AL V A S E +GP+VT KV FDM+IG +G IVIGLFG+ VPKT +NF
Sbjct: 1 MSRALLFFVLAILALSAEA-RGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFV 59
Query: 332 QLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGW 511
+LAQ+ EGEGY GSKFHRVI+NFMIQ RSIYGERFEDENF+L+HYG GW
Sbjct: 60 ELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGW 119
Query: 512 LSMANAGKDTNGISIF 559
LSMANAG+DTNG F
Sbjct: 120 LSMANAGEDTNGSQFF 135
>U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1
protein.
Length = 192
Score = 107 bits (257), Expect = 6e-24
Identities = 58/125 (46%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 391
KV FD+ IG++ G + + LF VPKT ENF L +G G +KGSKFHR+I
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRII 82
Query: 392 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIFSSHL 571
FMIQ SIYG +F+DENF LKH G G LSMANAG +TNG F
Sbjct: 83 PEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFIC-T 141
Query: 572 LKHPW 586
+ PW
Sbjct: 142 VDTPW 146
>AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical
protein Y49A3A.5 protein.
Length = 192
Score = 107 bits (257), Expect = 6e-24
Identities = 58/125 (46%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 391
KV FD+ IG++ G + + LF VPKT ENF L +G G +KGSKFHR+I
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRII 82
Query: 392 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIFSSHL 571
FMIQ SIYG +F+DENF LKH G G LSMANAG +TNG F
Sbjct: 83 PEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFIC-T 141
Query: 572 LKHPW 586
+ PW
Sbjct: 142 VDTPW 146
>Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical
protein T01B7.4 protein.
Length = 183
Score = 105 bits (251), Expect = 3e-23
Identities = 57/113 (50%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Frame = +2
Query: 236 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEG--EGYKGSKFHRVIKNF 400
V ++ G IGTIVI LF P+T ENF Q K +G GYK FHRVIK+F
Sbjct: 19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDF 78
Query: 401 MIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
MIQ SIYG +F DENF+LKH G G LSMANAG DTNG F
Sbjct: 79 MIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFF 131
>U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin
isoform 11 (CYP-11) protein.
Length = 183
Score = 105 bits (251), Expect = 3e-23
Identities = 57/113 (50%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Frame = +2
Query: 236 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEG--EGYKGSKFHRVIKNF 400
V ++ G IGTIVI LF P+T ENF Q K +G GYK FHRVIK+F
Sbjct: 19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDF 78
Query: 401 MIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
MIQ SIYG +F DENF+LKH G G LSMANAG DTNG F
Sbjct: 79 MIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFF 131
>Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical
protein ZK520.5 protein.
Length = 172
Score = 101 bits (242), Expect = 4e-22
Identities = 55/116 (47%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 391
KV FD+ IG G IV+ L+ VPKT ENF L +G+G +KGSKFHR+I
Sbjct: 5 KVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRII 64
Query: 392 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
FMIQ SI+GE+F+DENF+ KH G G LSMAN G +TNG F
Sbjct: 65 PEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFF 120
>U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin
isoform 3 protein.
Length = 173
Score = 101 bits (242), Expect = 4e-22
Identities = 57/116 (49%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 391
KV FD+ IG G IV+ L+ VPKT NF L G G +KGSKFHR+I
Sbjct: 5 KVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRII 64
Query: 392 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
NFMIQ SIYGE+F DENF+ KH G G LSMANAG +TNG F
Sbjct: 65 PNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFF 120
>AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical
protein Y75B12B.5 protein.
Length = 173
Score = 101 bits (242), Expect = 4e-22
Identities = 57/116 (49%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 391
KV FD+ IG G IV+ L+ VPKT NF L G G +KGSKFHR+I
Sbjct: 5 KVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRII 64
Query: 392 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
NFMIQ SIYGE+F DENF+ KH G G LSMANAG +TNG F
Sbjct: 65 PNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFF 120
>AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical
protein Y75B12B.2 protein.
Length = 171
Score = 99.5 bits (237), Expect = 2e-21
Identities = 55/116 (47%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 391
+V FD+ I G IV+ L+ VPKT ENF L +G G +KGSKFHR+I
Sbjct: 5 RVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRII 64
Query: 392 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
FMIQ SIYGE+F DENF+ KH G G LSMANAG +TNG F
Sbjct: 65 PEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFF 120
>U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin
protein.
Length = 171
Score = 97.5 bits (232), Expect = 7e-21
Identities = 54/116 (46%), Positives = 64/116 (55%), Gaps = 7/116 (6%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 391
+V FD+ G IV+ L+ VPKT ENF L +G G +KGSKFHR+I
Sbjct: 5 RVFFDITTAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRII 64
Query: 392 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
FMIQ SIYGE+F DENF+ KH G G LSMANAG +TNG F
Sbjct: 65 PEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFF 120
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 94.7 bits (225), Expect = 5e-20
Identities = 50/109 (45%), Positives = 61/109 (55%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQX 412
+V +KIG IG IVI L PKT ENF L G GY+GS FHR+I FM+Q
Sbjct: 140 RVYLGVKIGIRYIGRIVIELRTDVTPKTAENFRCLCTGERGFGYEGSIFHRIIPKFMLQG 199
Query: 413 XXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
+SIYG +F+DENF L+H G +SMAN G +TNG F
Sbjct: 200 GDFTKGDGTGGKSIYGTKFDDENFTLRHTMPGTVSMANCGANTNGSQFF 248
>U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin
isoform 2 (cyp-2) protein.
Length = 171
Score = 93.5 bits (222), Expect = 1e-19
Identities = 53/116 (45%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 391
KV D+ IG G IV+ L+ PKT ENF L +G+G +KGSKFHR+I
Sbjct: 5 KVFIDITIGGKKGGRIVMELYNDIAPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRII 64
Query: 392 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
FMIQ SI+GE+F+DENF+ KH G G LSMAN G +TNG F
Sbjct: 65 PEFMIQGGDFTEGNGTG-ESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFF 119
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 83.0 bits (196), Expect = 2e-16
Identities = 49/124 (39%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Frame = +2
Query: 206 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE------GYK 367
+P + + FD+ I + G IV L+ P+T ENF G+ Y+
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQ 60
Query: 368 GSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNG 547
GS FHRVIK FMIQ SIYG F+DEN LKH LSMAN G DTNG
Sbjct: 61 GSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNG 120
Query: 548 ISIF 559
F
Sbjct: 121 SQFF 124
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 83.0 bits (196), Expect = 2e-16
Identities = 49/124 (39%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Frame = +2
Query: 206 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE------GYK 367
+P + + FD+ I + G IV L+ P+T ENF G+ Y+
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQ 60
Query: 368 GSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNG 547
GS FHRVIK FMIQ SIYG F+DEN LKH LSMAN G DTNG
Sbjct: 61 GSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNG 120
Query: 548 ISIF 559
F
Sbjct: 121 SQFF 124
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 83.0 bits (196), Expect = 2e-16
Identities = 49/124 (39%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Frame = +2
Query: 206 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE------GYK 367
+P + + FD+ I + G IV L+ P+T ENF G+ Y+
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQ 60
Query: 368 GSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNG 547
GS FHRVIK FMIQ SIYG F+DEN LKH LSMAN G DTNG
Sbjct: 61 GSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNG 120
Query: 548 ISIF 559
F
Sbjct: 121 SQFF 124
>U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin
protein 12 protein.
Length = 169
Score = 79.4 bits (187), Expect = 2e-15
Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +2
Query: 260 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 439
D +G I + L+ P+T +NF QLA++ Y G+ FHR+I +FMIQ
Sbjct: 15 DTTMGKIALELYWNHAPRTCQNFSQLAKR---NYYNGTIFHRIIADFMIQGGDPTGTGRG 71
Query: 440 XXRSIYGERFEDE-NFQLKHYGAGWLSMANAGKDTNGISIF 559
SIYG++F DE + +LKH GAG LSMANAG +TNG F
Sbjct: 72 GA-SIYGDKFSDEIDERLKHTGAGILSMANAGPNTNGSQFF 111
>Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 75.4 bits (177), Expect = 3e-14
Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 388
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 389 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
+K FMIQ SIYG F+DE F+LKH LSMAN G ++N F
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFF 122
>Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 75.4 bits (177), Expect = 3e-14
Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 388
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 389 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
+K FMIQ SIYG F+DE F+LKH LSMAN G ++N F
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFF 122
>U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 75.4 bits (177), Expect = 3e-14
Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 388
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 389 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
+K FMIQ SIYG F+DE F+LKH LSMAN G ++N F
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFF 122
>U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 75.4 bits (177), Expect = 3e-14
Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 388
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 389 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFQLKHYGAGWLSMANAGKDTNGISIF 559
+K FMIQ SIYG F+DE F+LKH LSMAN G ++N F
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFF 122
>AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical
protein Y17G7B.9 protein.
Length = 483
Score = 66.5 bits (155), Expect = 1e-11
Identities = 46/122 (37%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = +2
Query: 197 SDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSK 376
S++ P T KV+ + GD I I L+ K P NF QL + YKG+
Sbjct: 2 SNQYINEPITTGKVTLETTAGD-----IEIELWTKEAPLACRNFIQLCME---NYYKGTV 53
Query: 377 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFQ-LKHYGAGWLSMANAGKDTNGIS 553
FHR++KNF++Q SIYG+ F+DE Q LK G + MANAG+D NG
Sbjct: 54 FHRLVKNFILQ-GGDPTATGTGGESIYGKPFKDEIHQRLKFNRRGIVGMANAGRDDNGSQ 112
Query: 554 IF 559
F
Sbjct: 113 FF 114
>AF393636-1|AAM19304.1| 222|Caenorhabditis elegans cyclophilin-16
protein.
Length = 222
Score = 66.5 bits (155), Expect = 1e-11
Identities = 46/122 (37%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = +2
Query: 197 SDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSK 376
S++ P T KV+ + GD I I L+ K P NF QL + YKG+
Sbjct: 2 SNQYINEPITTGKVTLETTAGD-----IEIELWTKEAPLACRNFIQLCME---NYYKGTV 53
Query: 377 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFQ-LKHYGAGWLSMANAGKDTNGIS 553
FHR++KNF++Q SIYG+ F+DE Q LK G + MANAG+D NG
Sbjct: 54 FHRLVKNFILQ-GGDPTATGTGGESIYGKPFKDEIHQRLKFNRRGIVGMANAGRDDNGSQ 112
Query: 554 IF 559
F
Sbjct: 113 FF 114
>AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical
protein Y87G2A.6 protein.
Length = 629
Score = 64.1 bits (149), Expect = 8e-11
Identities = 47/117 (40%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +2
Query: 266 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 445
+ G I I LFG PKT ENF +++ Y G FHRVIK+FMIQ
Sbjct: 481 SFGDITIRLFGDECPKTVENFCTHSRRGY---YNGLTFHRVIKSFMIQ-TGDPSGKGTGG 536
Query: 446 RSIYGERFEDE-NFQLKHYGAGWLSMANA-GKDTNGISIFSSHLLKHPWFRWQTCLF 610
SI+GE FEDE + +L+H +SMANA G +TNG F + + W + LF
Sbjct: 537 ESIWGEDFEDEFHPRLRHDKPFKVSMANAGGGNTNGSQFFIT-VCPADWLDGKNTLF 592
>U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical
protein T22F3.12 protein.
Length = 174
Score = 61.3 bits (142), Expect = 5e-10
Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Frame = +2
Query: 233 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMI-- 406
KV D+ +G +V L + PKT ENF +L P G GYK F+RVI F
Sbjct: 4 KVFMDITADGAPLGKLVFELNTEKCPKTCENFVKLCTGPPGFGYKNCVFYRVIPTFCACS 63
Query: 407 QXXXXXXXXXXXXRSIYGER-FEDENFQLKHYGAGWLSMANAGKDTNGISIFSSHLLKHP 583
+S +G + F+DENF++ H G L M N G + S F + P
Sbjct: 64 GDFETQNARRDGGKSTFGTKYFDDENFEILHDKKGILGMDNYGWENTNSSRFYVTFRETP 123
Query: 584 W 586
W
Sbjct: 124 W 124
>Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 60.5 bits (140), Expect = 9e-10
Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 266 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 445
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQ-GGDPTGTGHGG 342
Query: 446 RSIYGERFEDENFQ-LKHYGAGWLSMANAGKDTNGISIF 559
SI+ + F DE H G LSMAN G +TNG F
Sbjct: 343 ESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFF 381
>Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 60.5 bits (140), Expect = 9e-10
Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 266 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 445
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQ-GGDPTGTGHGG 342
Query: 446 RSIYGERFEDENFQ-LKHYGAGWLSMANAGKDTNGISIF 559
SI+ + F DE H G LSMAN G +TNG F
Sbjct: 343 ESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFF 381
>U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin
isoform 4 protein.
Length = 523
Score = 60.5 bits (140), Expect = 9e-10
Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 266 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 445
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQ-GGDPTGTGHGG 342
Query: 446 RSIYGERFEDENFQ-LKHYGAGWLSMANAGKDTNGISIF 559
SI+ + F DE H G LSMAN G +TNG F
Sbjct: 343 ESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFF 381
>AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin
MOG-6 protein.
Length = 523
Score = 60.5 bits (140), Expect = 9e-10
Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 266 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 445
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQ-GGDPTGTGHGG 342
Query: 446 RSIYGERFEDENFQ-LKHYGAGWLSMANAGKDTNGISIF 559
SI+ + F DE H G LSMAN G +TNG F
Sbjct: 343 ESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFF 381
>U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin
isoform 10 protein.
Length = 147
Score = 57.2 bits (132), Expect = 9e-09
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +2
Query: 272 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 451
G I I L+ PK ENF L + Y G FHR IK+FM+Q S
Sbjct: 10 GDIKIELYVDDAPKACENFLALCAS---DYYNGCIFHRNIKDFMVQTGDPTHSGKGG-ES 65
Query: 452 IYGERFEDENFQ-LKHYGAGWLSMANAGKDTNGISIFSSH 568
I+G FEDE LKH G +SMAN G D+N F ++
Sbjct: 66 IWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITY 105
>U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin
protein 10, isoform a protein.
Length = 147
Score = 57.2 bits (132), Expect = 9e-09
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +2
Query: 272 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 451
G I I L+ PK ENF L + Y G FHR IK+FM+Q S
Sbjct: 10 GDIKIELYVDDAPKACENFLALCAS---DYYNGCIFHRNIKDFMVQTGDPTHSGKGG-ES 65
Query: 452 IYGERFEDENFQ-LKHYGAGWLSMANAGKDTNGISIFSSH 568
I+G FEDE LKH G +SMAN G D+N F ++
Sbjct: 66 IWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITY 105
>U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin
protein 10, isoform b protein.
Length = 161
Score = 57.2 bits (132), Expect = 9e-09
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +2
Query: 272 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 451
G I I L+ PK ENF L + Y G FHR IK+FM+Q S
Sbjct: 10 GDIKIELYVDDAPKACENFLALCAS---DYYNGCIFHRNIKDFMVQTGDPTHSGKGG-ES 65
Query: 452 IYGERFEDENFQ-LKHYGAGWLSMANAGKDTNGISIFSSH 568
I+G FEDE LKH G +SMAN G D+N F ++
Sbjct: 66 IWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITY 105
>U28943-7|AAK68294.1| 315|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 56 protein.
Length = 315
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -2
Query: 502 SIVLQLEVFIFKTFTI---YTAPSSSITLGKITTLDHEIFNYSV 380
SIVL + +IF + + +TAP T+ +T ++H +N S+
Sbjct: 122 SIVLIIVSYIFPVYNMIIPFTAPRDFTTVQNLTAIEHSTYNLSL 165
>AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical
protein Y61B8A.2 protein.
Length = 356
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 481 VFIFKTFTIYTAPSSSITLGKITTLDHEIFNYSVELAPFVPLPL 350
+F T Y + SIT+ K T ++F +S+ L F+PL L
Sbjct: 228 LFQVTTLIYYICIAPSITISKDTHHRQKVFLFSILLQCFIPLTL 271
>AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical
protein Y17G9B.4 protein.
Length = 262
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 236 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENF 328
V + IG G IVI LF VP+T +NF
Sbjct: 99 VFIHVSIGGIEEGCIVIQLFNDIVPRTAQNF 129
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = -3
Query: 591 LNQGCFNRCDEKIE---IPFVSLPALAIDN 511
L+QG ++CD ++E IP SLP L I N
Sbjct: 3531 LHQGLSSKCDGRVEFQVIPVASLPKLNITN 3560
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = -3
Query: 591 LNQGCFNRCDEKIE---IPFVSLPALAIDN 511
L+QG ++CD ++E IP SLP L I N
Sbjct: 3531 LHQGLSSKCDGRVEFQVIPVASLPKLNITN 3560
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = -3
Query: 591 LNQGCFNRCDEKIE---IPFVSLPALAIDN 511
L+QG ++CD ++E IP SLP L I N
Sbjct: 3531 LHQGLSSKCDGRVEFQVIPVASLPKLNITN 3560
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = -3
Query: 591 LNQGCFNRCDEKIE---IPFVSLPALAIDN 511
L+QG ++CD ++E IP SLP L I N
Sbjct: 3531 LHQGLSSKCDGRVEFQVIPVASLPKLNITN 3560
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = -3
Query: 591 LNQGCFNRCDEKIE---IPFVSLPALAIDN 511
L+QG ++CD ++E IP SLP L I N
Sbjct: 3531 LHQGLSSKCDGRVEFQVIPVASLPKLNITN 3560
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = -3
Query: 591 LNQGCFNRCDEKIE---IPFVSLPALAIDN 511
L+QG ++CD ++E IP SLP L I N
Sbjct: 3531 LHQGLSSKCDGRVEFQVIPVASLPKLNITN 3560
>Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical
protein K12D12.2 protein.
Length = 1696
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +2
Query: 278 IVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKN 397
++ LF + + T ++ F Q P+ G GSK ++++N
Sbjct: 157 VIKNLFQQLINFTVQSEFARLQSPDVNGLGGSKHQKLVRN 196
>U22833-4|AAA64324.2| 181|Caenorhabditis elegans Hypothetical
protein W02B3.5 protein.
Length = 181
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -2
Query: 421 KITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLSK*SNHNSTNIVITNLHVK 242
K T HEIFN+ V + F L FL L++ S L+ + N I + VK
Sbjct: 54 KECTTKHEIFNFMVMASNF---NLNFLENLEKGQSKLKLVQKNRTVGNGLRITVALNEVK 110
Query: 241 AHL 233
AH+
Sbjct: 111 AHI 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,751,193
Number of Sequences: 27780
Number of extensions: 279376
Number of successful extensions: 676
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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