Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2442
         (349 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150276-1|AAI50277.1| 1618|Homo sapiens KIAA0556 protein.             29   3.0  
AB011128-1|BAA25482.2| 1625|Homo sapiens KIAA0556 protein protein.     29   3.0  
X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  28   7.0  
L07518-1|AAB61945.1|  505|Homo sapiens mucin protein.                  28   9.3  
AB209631-1|BAD92868.1| 1034|Homo sapiens Fibroblast growth facto...    28   9.3  

>BC150276-1|AAI50277.1| 1618|Homo sapiens KIAA0556 protein.
          Length = 1618

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/63 (25%), Positives = 24/63 (38%)
 Frame = -3

Query: 320 DAGLHVILSDAADKSVRDGESRVYPAVRVHNGERDFINDAVNRVTDVLSRRDEKRERDQD 141
           D GL         +SV   E       +VH+ + D  N   NR      RR  +++    
Sbjct: 805 DKGLRHEPGWGTSRSVNTKERPQRATTKVHSDDSDIFNQPPNRERPASGRRGSRKDAGSS 864

Query: 140 NHG 132
           +HG
Sbjct: 865 SHG 867


>AB011128-1|BAA25482.2| 1625|Homo sapiens KIAA0556 protein protein.
          Length = 1625

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/63 (25%), Positives = 24/63 (38%)
 Frame = -3

Query: 320  DAGLHVILSDAADKSVRDGESRVYPAVRVHNGERDFINDAVNRVTDVLSRRDEKRERDQD 141
            D GL         +SV   E       +VH+ + D  N   NR      RR  +++    
Sbjct: 812  DKGLRHEPGWGTSRSVNTKERPQRATTKVHSDDSDIFNQPPNRERPASGRRGSRKDAGSS 871

Query: 140  NHG 132
            +HG
Sbjct: 872  SHG 874


>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -3

Query: 110  HIVVDAHRVELEKPLYGAE 54
            ++ V+A  +E+EKPLYG E
Sbjct: 5246 NVTVEARLIEVEKPLYGVE 5264


>L07518-1|AAB61945.1|  505|Homo sapiens mucin protein.
          Length = 505

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
 Frame = -1

Query: 349 TSSCPSTCGPTPGCT*SFPTR--PISLFGMVKVEYIQQYVSI-TASGISSTMQSIGSPMY 179
           T+S  S+  PTP  T S PTR  P+S  G +    I+   +  T S   +T+ +   P  
Sbjct: 280 TTSATSSRPPTPITTHSSPTRSSPLSSTGPMTATSIKTTTTYPTPSHPQTTLTTHVPPFS 339

Query: 178 CRDVTRSENAIKIITVAL*CKRNTLLSMHTESSLRSPFTEPKTSNM-AGARRVG 20
              VT S + +   T A   + +T  S+H+  +   P   P T+ M  G+ R G
Sbjct: 340 TSSVTPSTHTVITPTHA---QMSTSASIHSTPTGTVP---PLTTRMPTGSTRTG 387


>AB209631-1|BAD92868.1| 1034|Homo sapiens Fibroblast growth factor
           receptor 4 variant protein.
          Length = 1034

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +1

Query: 202 ASLMKSRSPLWTRTAGYTLLSPSRTDLSAASERITCNPASAHMXKDKTK 348
           A++M++ SP+ T   G   ++PS+   S      TC PA+AH+  +K +
Sbjct: 202 ATMMRTPSPIGTSRIG--TVTPSKVSRSPR----TCVPAAAHLITEKRR 244


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,772,736
Number of Sequences: 237096
Number of extensions: 988567
Number of successful extensions: 2449
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2449
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)