Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2440
(670 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p pro... 256 2e-68
AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer pro... 254 6e-68
AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA... 254 6e-68
BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p pro... 253 1e-67
AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB... 253 1e-67
BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p pro... 40 0.003
AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protei... 40 0.003
AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein. 40 0.003
AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA... 40 0.003
BT011104-1|AAR82770.1| 389|Drosophila melanogaster LP09056p pro... 28 10.0
AY484405-1|AAR86939.1| 857|Drosophila melanogaster reverse tran... 28 10.0
AY484404-1|AAR86938.1| 857|Drosophila melanogaster reverse tran... 28 10.0
AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC... 28 10.0
AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB... 28 10.0
AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA... 28 10.0
>AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p
protein.
Length = 878
Score = 256 bits (628), Expect = 2e-68
Identities = 127/196 (64%), Positives = 150/196 (76%)
Frame = +3
Query: 63 SIMKARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELT 242
S + + D ++ SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L
Sbjct: 3 SFRREKDDEEDGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLV 62
Query: 243 TQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRP 422
+EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR
Sbjct: 63 AREATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRA 122
Query: 423 AAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQ 602
AAIRALCSITD+TMLQA+ERYMKQ IVDKN D+V+RW NEAQ
Sbjct: 123 AAIRALCSITDNTMLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQ 182
Query: 603 EAMTSDHVMGFLPCLG 650
EA+ SD++M LG
Sbjct: 183 EALNSDNIMVQYHALG 198
>AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer
protein gamma subunit protein.
Length = 879
Score = 254 bits (623), Expect = 6e-68
Identities = 129/194 (66%), Positives = 148/194 (76%), Gaps = 3/194 (1%)
Frame = +3
Query: 78 RRDGKEED---SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQ 248
R EED SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +
Sbjct: 6 REKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 65
Query: 249 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAA 428
EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AA
Sbjct: 66 EATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAA 125
Query: 429 IRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEA 608
IRALCSITD+TMLQA+ERYMKQ IVDKN D+V+RW NEAQEA
Sbjct: 126 IRALCSITDNTMLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQEA 185
Query: 609 MTSDHVMGFLPCLG 650
+ SD++M LG
Sbjct: 186 LNSDNIMVQYHALG 199
>AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA,
isoform A protein.
Length = 879
Score = 254 bits (623), Expect = 6e-68
Identities = 129/194 (66%), Positives = 148/194 (76%), Gaps = 3/194 (1%)
Frame = +3
Query: 78 RRDGKEED---SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQ 248
R EED SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +
Sbjct: 6 REKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 65
Query: 249 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAA 428
EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AA
Sbjct: 66 EATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAA 125
Query: 429 IRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEA 608
IRALCSITD+TMLQA+ERYMKQ IVDKN D+V+RW NEAQEA
Sbjct: 126 IRALCSITDNTMLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQEA 185
Query: 609 MTSDHVMGFLPCLG 650
+ SD++M LG
Sbjct: 186 LNSDNIMVQYHALG 199
>BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p
protein.
Length = 883
Score = 253 bits (620), Expect = 1e-67
Identities = 125/183 (68%), Positives = 144/183 (78%)
Frame = +3
Query: 102 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 281
SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +EATD FFA TK
Sbjct: 21 SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80
Query: 282 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDST 461
LFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AAIRALCSITD+T
Sbjct: 81 LFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNT 140
Query: 462 MLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMGFLP 641
MLQA+ERYMKQ IVDKN D+V+RW NEAQEA+ SD++M
Sbjct: 141 MLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQEALNSDNIMVQYH 200
Query: 642 CLG 650
LG
Sbjct: 201 ALG 203
>AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB,
isoform B protein.
Length = 883
Score = 253 bits (620), Expect = 1e-67
Identities = 125/183 (68%), Positives = 144/183 (78%)
Frame = +3
Query: 102 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 281
SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +EATD FFA TK
Sbjct: 21 SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80
Query: 282 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDST 461
LFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AAIRALCSITD+T
Sbjct: 81 LFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNT 140
Query: 462 MLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMGFLP 641
MLQA+ERYMKQ IVDKN D+V+RW NEAQEA+ SD++M
Sbjct: 141 MLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQEALNSDNIMVQYH 200
Query: 642 CLG 650
LG
Sbjct: 201 ALG 203
>BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p
protein.
Length = 1159
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 246 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 422
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 55 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 114
Query: 423 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 515
+A+R L SI S ++ + ++ + D +P
Sbjct: 115 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 145
>AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protein
protein.
Length = 1160
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 246 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 422
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134
Query: 423 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 515
+A+R L SI S ++ + ++ + D +P
Sbjct: 135 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 165
>AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein.
Length = 1160
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 246 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 422
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134
Query: 423 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 515
+A+R L SI S ++ + ++ + D +P
Sbjct: 135 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 165
>AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA
protein.
Length = 1160
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 246 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 422
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134
Query: 423 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 515
+A+R L SI S ++ + ++ + D +P
Sbjct: 135 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 165
>BT011104-1|AAR82770.1| 389|Drosophila melanogaster LP09056p
protein.
Length = 389
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 500 NSLFHVPLNSLQHCTVCDATQSSNGGRS 417
+ L H L +Q+ DAT+SS+GG S
Sbjct: 49 SGLLHTELREVQNAIDSDATESSSGGES 76
>AY484405-1|AAR86939.1| 857|Drosophila melanogaster reverse
transcriptase protein.
Length = 857
Score = 28.3 bits (60), Expect = 10.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 102 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILY 215
SN N D+TT+LQ+ +++N H + +HI+ Y
Sbjct: 785 SNHTPNFDETTILQQEQHYNKR--HTLEMLHIINTPTY 820
>AY484404-1|AAR86938.1| 857|Drosophila melanogaster reverse
transcriptase protein.
Length = 857
Score = 28.3 bits (60), Expect = 10.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 102 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILY 215
SN N D+TT+LQ+ +++N H + +HI+ Y
Sbjct: 785 SNHTPNFDETTILQQEQHYNKR--HTLEMLHIINTPTY 820
>AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC,
isoform C protein.
Length = 1570
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 500 NSLFHVPLNSLQHCTVCDATQSSNGGRS 417
+ L H L +Q+ DAT+SS+GG S
Sbjct: 596 SGLLHTELREVQNAIDSDATESSSGGES 623
>AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB,
isoform B protein.
Length = 1570
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 500 NSLFHVPLNSLQHCTVCDATQSSNGGRS 417
+ L H L +Q+ DAT+SS+GG S
Sbjct: 596 SGLLHTELREVQNAIDSDATESSSGGES 623
>AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA,
isoform A protein.
Length = 1570
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 500 NSLFHVPLNSLQHCTVCDATQSSNGGRS 417
+ L H L +Q+ DAT+SS+GG S
Sbjct: 596 SGLLHTELREVQNAIDSDATESSSGGES 623
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,058,664
Number of Sequences: 53049
Number of extensions: 649978
Number of successful extensions: 1565
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1560
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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