Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2439
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical pr... 78 6e-15
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 77 1e-14
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 77 1e-14
U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical pr... 74 8e-14
Z49127-6|CAA88947.1| 454|Caenorhabditis elegans Hypothetical pr... 73 1e-13
U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical ... 71 1e-12
AL021474-4|CAD54164.1| 445|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z78064-7|CAK12566.1| 195|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z78064-6|CAK12565.1| 225|Caenorhabditis elegans Hypothetical pr... 27 9.0
>U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical
protein F41C3.5 protein.
Length = 469
Score = 77.8 bits (183), Expect = 6e-15
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Frame = +1
Query: 214 LLLTPFIEQKKLKEGREAAAVDADYLLPDMESYAGYLTVNKEYNANLWFWYFPVSGKPIE 393
LLL F+ +E ++ +D + P+ + Y+G+ V+ N L +W+ +P
Sbjct: 5 LLLAFFVGVTCGEEIKDLPGLDFE---PNFKHYSGFFQVSD--NHVLHYWFVESQNEPSN 59
Query: 394 ETPWIIWLQGGPGASSLYGLFTELGPFFVTEDNH-LEEMKYSWGKNHSLLFIDSPVGTG 567
+ P I W GGPG SSL GL E+GP+ ED L E +YSW K S+++I+SP G G
Sbjct: 60 D-PLIFWFNGGPGCSSLDGLLNEMGPYVANEDGKTLRENEYSWNKMASVVYIESPAGVG 117
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +1
Query: 310 YAGYLTVNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGPFFVTED 489
++GYLT ++ +L++W+ P+ + P ++WL GGPG SSL G FTELGPF +D
Sbjct: 1042 FSGYLTADETPLNHLFYWFVESQNDPVND-PVVLWLNGGPGCSSLGGFFTELGPFHPNDD 1100
Query: 490 --NHLEEMKYSWGKNHSLLFIDSPVGTG 567
L E +SW K +++F+++P G
Sbjct: 1101 GGQTLYENVFSWNKKANVIFLEAPAKVG 1128
Score = 75.4 bits (177), Expect = 3e-14
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Frame = +1
Query: 211 PLLLTPFIEQKKLKEGREAAAVDADYLLPDM--ESYAGYLTVNKEYNANLWFWYFPVSGK 384
P LT I Q G+ ++ L DM + Y+G+L + + +W
Sbjct: 1530 PQPLTNVISQTNCTTGQTDRIINLPGLPADMLFKQYSGFLDGLSGHKVH--YWLVESENN 1587
Query: 385 PIEETPWIIWLQGGPGASSLYGLFTELGPFFVTEDNH-LEEMKYSWGKNHSLLFIDSPVG 561
P + P ++WL GGPG+SSL GLF E GPF V++D+ L YSW K ++L+++SP+G
Sbjct: 1588 PSTD-PLLLWLNGGPGSSSLMGLFEENGPFRVSKDSQTLSRNPYSWNKFANVLYLESPIG 1646
Query: 562 TG 567
G
Sbjct: 1647 VG 1648
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Frame = +1
Query: 298 DMESYAGYLTV--NKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGP 471
+ + YAGYL NK YN NL +W P +T ++W+ GGPG SS++G E+GP
Sbjct: 45 NFKQYAGYLNSDPNKNYN-NLHYWLIESQLTPSNDT-LLLWINGGPGCSSVFGQIQEIGP 102
Query: 472 FFVTEDNH-LEEMKYSWGKNHSLLFIDSPVGTG 567
F V+ D+ + E ++W K +LL ID P G G
Sbjct: 103 FHVSSDSQTVYENVFAWNKVSNLLAIDGP-GAG 134
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +1
Query: 298 DMESYAGYLTVNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGPFF 477
+ Y+GYL + + + WF S +P ++WL GGPG+SSL+G+ TE GPF
Sbjct: 515 NFNQYSGYLNASDTHRFHYWF---VESQNDPTNSPVLLWLNGGPGSSSLWGMLTENGPFR 571
Query: 478 VTEDNH-LEEMKYSWGKNHSLLFIDSPVGTG 567
+D L E +SW K ++L+++SP G
Sbjct: 572 PNKDGQTLYENVHSWNKFANVLYLESPHQVG 602
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +1
Query: 310 YAGYLTVNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGPFFVTED 489
++GYLT ++ +L++W+ P+ + P ++WL GGPG SSL G FTELGPF +D
Sbjct: 1042 FSGYLTADETPLNHLFYWFVESQNDPVND-PVVLWLNGGPGCSSLGGFFTELGPFHPNDD 1100
Query: 490 --NHLEEMKYSWGKNHSLLFIDSPVGTG 567
L E +SW K +++F+++P G
Sbjct: 1101 GGQTLYENVFSWNKKANVIFLEAPAKVG 1128
Score = 75.4 bits (177), Expect = 3e-14
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Frame = +1
Query: 211 PLLLTPFIEQKKLKEGREAAAVDADYLLPDM--ESYAGYLTVNKEYNANLWFWYFPVSGK 384
P LT I Q G+ ++ L DM + Y+G+L + + +W
Sbjct: 1530 PQPLTNVISQTNCTTGQTDRIINLPGLPADMLFKQYSGFLDGLSGHKVH--YWLVESENN 1587
Query: 385 PIEETPWIIWLQGGPGASSLYGLFTELGPFFVTEDNH-LEEMKYSWGKNHSLLFIDSPVG 561
P + P ++WL GGPG+SSL GLF E GPF V++D+ L YSW K ++L+++SP+G
Sbjct: 1588 PSTD-PLLLWLNGGPGSSSLMGLFEENGPFRVSKDSQTLSRNPYSWNKFANVLYLESPIG 1646
Query: 562 TG 567
G
Sbjct: 1647 VG 1648
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Frame = +1
Query: 298 DMESYAGYLTV--NKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGP 471
+ + YAGYL NK YN NL +W P +T ++W+ GGPG SS++G E+GP
Sbjct: 45 NFKQYAGYLNSDPNKNYN-NLHYWLIESQLTPSNDT-LLLWINGGPGCSSVFGQIQEIGP 102
Query: 472 FFVTEDNH-LEEMKYSWGKNHSLLFIDSPVGTG 567
F V+ D+ + E ++W K +LL ID P G G
Sbjct: 103 FHVSSDSQTVYENVFAWNKVSNLLAIDGP-GAG 134
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +1
Query: 298 DMESYAGYLTVNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGPFF 477
+ Y+GYL + + + WF S +P ++WL GGPG+SSL+G+ TE GPF
Sbjct: 515 NFNQYSGYLNASDTHRFHYWF---VESQNDPTNSPVLLWLNGGPGSSSLWGMLTENGPFR 571
Query: 478 VTEDNH-LEEMKYSWGKNHSLLFIDSPVGTG 567
+D L E +SW K ++L+++SP G
Sbjct: 572 PNKDGQTLYENVHSWNKFANVLYLESPHQVG 602
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 77.0 bits (181), Expect = 1e-14
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +1
Query: 310 YAGYLTVNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGPFFVTED 489
++GYL + N F++F S E P I+WLQGGPG +S GLF+E+GPFFV D
Sbjct: 1683 HSGYLQATR---GNKLFYWFVESQSGNEGDPIILWLQGGPGCASTGGLFSEIGPFFVNPD 1739
Query: 490 NH-LEEMKYSWGKNHSLLFIDSPVGTG 567
L E YSW K +L IDSP G G
Sbjct: 1740 GETLFENIYSWNKAAHILIIDSPRGVG 1766
Score = 71.3 bits (167), Expect = 6e-13
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +1
Query: 298 DMESYAGYLT-VNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGPF 474
+ + Y+GYL V Y L +W+ G P + P ++WL GGPG S L + TELGPF
Sbjct: 588 NFKQYSGYLNGVTGNY---LHYWFVESQGNPTTD-PLVLWLTGGPGCSGLMAMLTELGPF 643
Query: 475 FVTEDNH-LEEMKYSWGKNHSLLFIDSPVGTG 567
D L E YSW K +++F++SP G G
Sbjct: 644 HPNPDGKTLFENVYSWNKAANVIFLESPRGVG 675
Score = 64.9 bits (151), Expect = 5e-11
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +1
Query: 295 PDMESYAGYLTVNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGPF 474
P+ + Y+GYL N L +W S P I+WL GGPG SS+ G ELGPF
Sbjct: 1145 PNFKQYSGYL--NASAGNYLHYWLVE-SQLNATYDPLILWLNGGPGCSSIGGFLEELGPF 1201
Query: 475 FVTEDNH-LEEMKYSWGKNHSLLFIDSPVGTGV*F 576
V D L E +SW K ++LF+++P G F
Sbjct: 1202 HVNADGKTLFENTFSWNKAGNVLFLEAPRDVGYSF 1236
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +1
Query: 295 PDMESYAGYLTVNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGPF 474
P + Y+GYL ++ +L +W P + P ++WL GGPG SSL GL +E GP+
Sbjct: 39 PTFKQYSGYLDGSQ--GNHLHYWLVESQTNP-QTAPIVLWLNGGPGCSSLLGLLSENGPY 95
Query: 475 FVTEDN-HLEEMKYSWGKNHSLLFIDSPVGTG 567
+ +D + E SW K ++LF++SP G
Sbjct: 96 RIQKDGVTVIENVNSWNKAANVLFLESPRDVG 127
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +1
Query: 310 YAGYLTVNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGPFFVTED 489
++GYLT ++ +L++W+ P+ + P ++WL GGPG SSL G FTELGPF +D
Sbjct: 1042 FSGYLTADETPLNHLFYWFVESQNDPVND-PVVLWLNGGPGCSSLGGFFTELGPFHPNDD 1100
Query: 490 --NHLEEMKYSWGKNHSLLFIDSPVGTG 567
L E +SW K +++F+++P G
Sbjct: 1101 GGQTLYENVFSWNKKANVIFLEAPAKVG 1128
Score = 75.4 bits (177), Expect = 3e-14
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Frame = +1
Query: 211 PLLLTPFIEQKKLKEGREAAAVDADYLLPDM--ESYAGYLTVNKEYNANLWFWYFPVSGK 384
P LT I Q G+ ++ L DM + Y+G+L + + +W
Sbjct: 1530 PQPLTNVISQTNCTTGQTDRIINLPGLPADMLFKQYSGFLDGLSGHKVH--YWLVESENN 1587
Query: 385 PIEETPWIIWLQGGPGASSLYGLFTELGPFFVTEDNH-LEEMKYSWGKNHSLLFIDSPVG 561
P + P ++WL GGPG+SSL GLF E GPF V++D+ L YSW K ++L+++SP+G
Sbjct: 1588 PSTD-PLLLWLNGGPGSSSLMGLFEENGPFRVSKDSQTLSRNPYSWNKFANVLYLESPIG 1646
Query: 562 TG 567
G
Sbjct: 1647 VG 1648
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Frame = +1
Query: 298 DMESYAGYLTV--NKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGP 471
+ + YAGYL NK YN NL +W P +T ++W+ GGPG SS++G E+GP
Sbjct: 45 NFKQYAGYLNSDPNKNYN-NLHYWLIESQLTPSNDT-LLLWINGGPGCSSVFGQIQEIGP 102
Query: 472 FFVTEDNH-LEEMKYSWGKNHSLLFIDSPVGTG 567
F V+ D+ + E ++W K +LL ID P G G
Sbjct: 103 FHVSSDSQTVYENVFAWNKVSNLLAIDGP-GAG 134
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +1
Query: 298 DMESYAGYLTVNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGPFF 477
+ Y+GYL + + + WF S +P ++WL GGPG+SSL+G+ TE GPF
Sbjct: 515 NFNQYSGYLNASDTHRFHYWF---VESQNDPTNSPVLLWLNGGPGSSSLWGMLTENGPFR 571
Query: 478 VTEDNH-LEEMKYSWGKNHSLLFIDSPVGTG 567
+D L E +SW K ++L+++SP G
Sbjct: 572 PNKDGQTLYENVHSWNKFANVLYLESPHQVG 602
>U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical
protein F32A5.3 protein.
Length = 574
Score = 74.1 bits (174), Expect = 8e-14
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Frame = +1
Query: 214 LLLTPFIEQKKLKEGREAAAVDADYLL--PDMESYAGYLTVNKEYNANLWFWYFPVSGKP 387
LL F+ L +G + + LL + +SY+GY+ N + + P
Sbjct: 5 LLGVAFLVVTVLSQGEKDLIQNLPGLLFKANFKSYSGYVDANANGTWKMHYMLTESRSNP 64
Query: 388 IEETPWIIWLQGGPGASSLYGLFTELGPFFVTEDNH-LEEMKYSWGKNHSLLFIDSPVGT 564
+ P ++W GGPG SSL GLF ELGPF+V D L E Y+W ++L+++SP+G
Sbjct: 65 -DTDPLLVWFNGGPGCSSLGGLFEELGPFYVNFDGQTLYENPYAWNAKANVLYLESPIGV 123
Query: 565 G 567
G
Sbjct: 124 G 124
>Z49127-6|CAA88947.1| 454|Caenorhabditis elegans Hypothetical
protein F13D12.6 protein.
Length = 454
Score = 73.3 bits (172), Expect = 1e-13
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +1
Query: 292 LPDMESYAGYLTVNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGP 471
+ + + Y+GY V + N L +W+ P + P ++WL GGPG S L L TE GP
Sbjct: 32 ISNFKQYSGYYNVGTKKNHMLHYWFVESQSNPSTD-PVLLWLTGGPGCSGLSALLTEWGP 90
Query: 472 FFVTEDN-HLEEMKYSWGKNHSLLFIDSPVGTG 567
+ V D L YSW KN S+L +++P G G
Sbjct: 91 WNVNTDGATLRTNPYSWNKNASILTLEAPAGVG 123
>U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical
protein K10B2.2a protein.
Length = 470
Score = 73.3 bits (172), Expect = 1e-13
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +1
Query: 295 PDMESYAGYLTVNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGPF 474
PD Y+GYL + L +W S P ++ P ++WL GGPG SSL GL ELGPF
Sbjct: 36 PDFFHYSGYLRAWTD--KYLHYWLTESSRAPTQD-PLVLWLNGGPGCSSLDGLIEELGPF 92
Query: 475 FVTE-DNHLEEMKYSWGKNHSLLFIDSPVGTG 567
V + N + +Y+W K ++LF++SP G G
Sbjct: 93 HVKDFGNSIYYNEYAWNKFANVLFLESPAGVG 124
>Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical
protein C08H9.1 protein.
Length = 505
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +1
Query: 292 LPDMESYAGYLTVNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGP 471
+PD++ +GYL N+ ++++ P+ E IIW GGPG SSL F E GP
Sbjct: 32 IPDLKLQSGYLNANENGTQKMFYFLLEARDIPVGEASLIIWFNGGPGCSSLSAFFEEFGP 91
Query: 472 FFVT-EDNHLEEMKYSWGKNHSLLFIDSPVGTG 567
+V L E +SW ++LF++SP+G G
Sbjct: 92 LYVNFGGKSLFENVHSWYHKANILFLESPIGVG 124
>AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical
protein Y40D12A.2 protein.
Length = 512
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Frame = +1
Query: 310 YAGYLTVNKEYNANLWFWYFPVSGKPIEETPWIIWLQGGPGASSLYGLFTELGPFFVTED 489
YAGYL+++ L++WY P E P ++WL GGPG +S+ GLF E+GPF V
Sbjct: 37 YAGYLSISDV--KQLFYWYVESEESP-ETAPVVLWLNGGPGCASMEGLFIEMGPFRVR-- 91
Query: 490 NHLEEMK---YSWGKNHSLLFIDSPVGTG 567
N+ EE+ ++W + +++++D+P G G
Sbjct: 92 NYGEEVNRNPWTWNRIANIIYLDAPAGVG 120
>AL021474-4|CAD54164.1| 445|Caenorhabditis elegans Hypothetical
protein Y32F6A.5 protein.
Length = 445
Score = 48.8 bits (111), Expect = 3e-06
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +1
Query: 316 GYLTVNKEYNANLWFWYFPVSGKPIE-ETPWIIWLQGGPGASSL-YGLFTELGPFFVTED 489
GY+ + NA+ ++W + + KP + P +WLQGGPG+SS +G F E GP +
Sbjct: 35 GYVDIRT--NAHTFWWLY--AAKPANSQRPLFLWLQGGPGSSSSGFGNFEETGPKTLNGS 90
Query: 490 NHLEEMKYSWGKNHSLLFIDSPVGTG 567
++ +W + ++++D+PVG G
Sbjct: 91 DN----PATWLQVADMVYVDNPVGAG 112
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 566 GFSFTDDDRGYATNQTTIGENLYTALQQFLTL 661
GFS+ DD Y T T IG++L L++FL L
Sbjct: 112 GFSYVDDKSAYTTEITQIGKDLLAWLRKFLAL 143
>Z78064-7|CAK12566.1| 195|Caenorhabditis elegans Hypothetical
protein F57B1.6b protein.
Length = 195
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 13 LDHSILICDMKLLITFLLLICAQQA 87
L H++L+C +L +F+ ICAQ A
Sbjct: 93 LAHALLMCGACILSSFVSFICAQNA 117
>Z78064-6|CAK12565.1| 225|Caenorhabditis elegans Hypothetical
protein F57B1.6a protein.
Length = 225
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 13 LDHSILICDMKLLITFLLLICAQQA 87
L H++L+C +L +F+ ICAQ A
Sbjct: 123 LAHALLMCGACILSSFVSFICAQNA 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,228,049
Number of Sequences: 27780
Number of extensions: 314867
Number of successful extensions: 775
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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