Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2439
         (663 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.0  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   2.0  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   2.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.4  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 364 YFPVSGKPIEETPWIIWLQGG 426
           Y P    P +  P I W+ GG
Sbjct: 111 YVPADRTPSQSLPVIFWIHGG 131


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 364 YFPVSGKPIEETPWIIWLQGG 426
           Y P    P +  P I W+ GG
Sbjct: 111 YVPADRTPSQSLPVIFWIHGG 131


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 211 PLLLTPFIEQKKLKEGREAAAVDADYLL 294
           P+    +I +   KE R +AA+D+ Y+L
Sbjct: 317 PIYKYKYIREIMNKESRISAAIDSGYIL 344



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 542 NRSEWFLPHEYFISSK 495
           N S W+L H+Y + +K
Sbjct: 204 NYSGWYLNHDYNLENK 219


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 211 PLLLTPFIEQKKLKEGREAAAVDADYLL 294
           P+    +I +   KE R +AA+D+ Y+L
Sbjct: 317 PIYKYKYIREIMNKESRISAAIDSGYIL 344



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 542 NRSEWFLPHEYFISSK 495
           N S W+L H+Y + +K
Sbjct: 204 NYSGWYLNHDYNLENK 219


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 588 SSSVKLNPSSNRAIDEQKRMVLAP 517
           ++SVK  P S  A+ E  + VL+P
Sbjct: 891 ATSVKAEPGSIMAMSESSKKVLSP 914


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 139 LGPRPEEVRGERSPRPLTLVER 74
           LGP  + + G  SPRP  L+++
Sbjct: 18  LGPAGQVLAGSSSPRPKPLLKK 39


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 370 PVSGKPIEETPW 405
           PV+G PIEE  W
Sbjct: 541 PVAGYPIEEIKW 552


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 370 PVSGKPIEETPW 405
           PV+G PIEE  W
Sbjct: 541 PVAGYPIEEIKW 552


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,289
Number of Sequences: 438
Number of extensions: 3937
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)