BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2437
(742 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 25 1.9
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 25 2.5
AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse t... 24 4.3
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 24 5.7
AY255857-1|AAP13483.1| 216|Anopheles gambiae glutathione tranfe... 23 9.9
AY146748-1|AAO12063.1| 279|Anopheles gambiae odorant-binding pr... 23 9.9
AY028785-1|AAK32959.1| 509|Anopheles gambiae cytochrome P450 pr... 23 9.9
AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9... 23 9.9
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 23 9.9
>AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein.
Length = 525
Score = 25.4 bits (53), Expect = 1.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 528 YLMLTADTMWKFVCLP 481
Y+ LTADT ++F C P
Sbjct: 488 YICLTADTYYEFTCPP 503
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 25.0 bits (52), Expect = 2.5
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 439 FIWETAQNKQYVTNRQTNKLPHGVRCQHQI*L*KEQRNISTWIHLLGLKLYNLKITNFTG 618
F + +NK +V + T +PH V Q+ + ++++ + L K Y+L + TG
Sbjct: 938 FFMLSLENKPHVFDCYTTVIPHTVLTQYNYTVNTDEKDSFVLGYRLVKKKYHLYVKKSTG 997
>AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 24.2 bits (50), Expect = 4.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 497 FHMVSAVNIRYDCRKNKETFPHGFI 571
F +V N+ Y CR + HGF+
Sbjct: 15 FELVIYNNLLYACRSYLSPYQHGFV 39
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.8 bits (49), Expect = 5.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 330 RRLTRGPTTSNYANYNKLC 386
+R TR PTTS + + + LC
Sbjct: 92 QRATRAPTTSTWTSKSVLC 110
>AY255857-1|AAP13483.1| 216|Anopheles gambiae glutathione
tranferase d9 protein.
Length = 216
Score = 23.0 bits (47), Expect = 9.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 503 CGSLFVCLFVTY 468
CG+L+ C+FV Y
Sbjct: 102 CGTLYKCIFVYY 113
>AY146748-1|AAO12063.1| 279|Anopheles gambiae odorant-binding
protein AgamOBP41 protein.
Length = 279
Score = 23.0 bits (47), Expect = 9.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 174 WLLEPIDIYNVNVPPTLRYKLQGLNIQQLPC 266
++ +P D YNVN T +L L + C
Sbjct: 98 FVTDPADAYNVNRTETCLQELPALELNAEKC 128
>AY028785-1|AAK32959.1| 509|Anopheles gambiae cytochrome P450
protein.
Length = 509
Score = 23.0 bits (47), Expect = 9.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 173 VVTGAHRHLQRKCATHLEI*APRSQYTT 256
V T HRHL + LE+ A +++TT
Sbjct: 156 VATELHRHLLEQIDRELEMKAVLARFTT 183
>AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9
protein.
Length = 685
Score = 23.0 bits (47), Expect = 9.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 369 NYNKLCLDSENYCG 410
N N+ C DS +YCG
Sbjct: 618 NENENCNDSHSYCG 631
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 23.0 bits (47), Expect = 9.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 650 NHLAAFIFYLLPVTLSW 700
NHL F + L+P L W
Sbjct: 557 NHLEVFDYALIPTGLQW 573
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 798,390
Number of Sequences: 2352
Number of extensions: 17457
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -