Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2434
(525 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 36 0.013
AC006633-6|AAK68378.4| 578|Caenorhabditis elegans Hypothetical ... 28 0.082
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily a... 31 0.50
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 31 0.50
AF024493-5|AAB70324.1| 583|Caenorhabditis elegans Hypothetical ... 31 0.50
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 31 0.67
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 30 1.2
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 1.2
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 1.2
Z66520-8|CAE17837.1| 357|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 2.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 2.0
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 29 2.7
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 29 2.7
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 29 2.7
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 29 2.7
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 3.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 3.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 3.6
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 28 3.6
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 28 3.6
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 4.7
Z81066-7|CAB02973.1| 244|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 27 6.2
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL022289-6|CAA18377.1| 244|Caenorhabditis elegans Hypothetical ... 27 6.2
Z83235-1|CAB05775.1| 174|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 27 8.2
AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein. 27 8.2
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 27 8.2
AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle defec... 27 8.2
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 36.3 bits (80), Expect = 0.013
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +1
Query: 277 STAPTNTDSSQPARASPLRLQPSSTSRPGTRDSDP--GSRREVDHS-TEPRLHNQTMTTR 447
++ PT + P +PL P +T+R S P S+R V + T PR TTR
Sbjct: 305 TSRPTTPSPTTPRATTPLATTPLATTRAPLPPSPPPRTSKRPVTQAPTTPR----ATTTR 360
Query: 448 NPRLHRPRDPVPNRNHNPST 507
P PR P P R P T
Sbjct: 361 RPTTTTPR-PTPRRTRRPKT 379
>AC006633-6|AAK68378.4| 578|Caenorhabditis elegans Hypothetical
protein F35B3.7 protein.
Length = 578
Score = 27.9 bits (59), Expect(2) = 0.082
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 343 SSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRNPRLHRPRDPVPNRN 492
S T +P + ++ R +D T R +Q T P HRP+ N N
Sbjct: 285 SGTWQPFSSNTYNADRPPIDFVTSTRYSHQEATIFRPIAHRPKPDFINHN 334
Score = 24.6 bits (51), Expect(2) = 0.082
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 277 STAPTNTDSSQPARASPLRLQPSST 351
ST P DSS PA L ++P +T
Sbjct: 226 STTPRIRDSSAPATVQRLTIKPQTT 250
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 32.7 bits (71), Expect = 0.17
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 202 RLNRKQVM*RANMDTRTTLASYE*LSTAPTNTDSSQPARASPLRLQPSSTSRPGTRDSDP 381
R+ R++++ ++++D T S S P + + + + P SS+ RP S+
Sbjct: 125 RVRREELLDQSSLDGITFETSGTNTSDEPHSQIITSNSSSLPSTSASSSSDRPRAMRSNQ 184
Query: 382 GSR--REVDHSTEPRLHNQTMTTRNPRLHRPRDPVPNRNHNPSTGPPPL 522
R R + + +Q M + RL + PVP HN TG P L
Sbjct: 185 EMRQARRARRQRQTQHESQRMQLEH-RLQQITGPVPGSEHNCMTGCPHL 232
>AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform b protein.
Length = 648
Score = 31.1 bits (67), Expect = 0.50
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = -2
Query: 392 LRLPGSESLVPGRLVDEGW---RRNGDALAGWLESVFVGAVLN 273
L+L +SL R + +GW R GD L GW S +V A++N
Sbjct: 548 LQLNIGDSLNILRKMPDGWLYGERAGDGLGGWFPSSYVQAIIN 590
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 31.1 bits (67), Expect = 0.50
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = -2
Query: 392 LRLPGSESLVPGRLVDEGW---RRNGDALAGWLESVFVGAVLN 273
L+L +SL R + +GW R GD L GW S +V A++N
Sbjct: 1036 LQLNIGDSLNILRKMPDGWLYGERAGDGLGGWFPSSYVQAIIN 1078
>AF024493-5|AAB70324.1| 583|Caenorhabditis elegans Hypothetical
protein F23F1.6 protein.
Length = 583
Score = 31.1 bits (67), Expect = 0.50
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = -2
Query: 329 NGDALAGWLESVFVGAVLNHS*LASV-VLVS--IFALHITCLRFSLDLEGSIGGFIAISV 159
NG L W+ F G N S S+ V V+ IF + F + + GG I ++V
Sbjct: 427 NGGCLKSWVP--FQGVWENFSEGISIRVAVAGLIFGYICLAIPFRTGIFSNAGGIILLTV 484
Query: 158 GAVFVVSVYLFQYGHRR 108
GA F + ++F GH +
Sbjct: 485 GAAFSLLSFVFILGHEQ 501
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 30.7 bits (66), Expect = 0.67
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 301 SSQPARASPLRLQPSSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRNP-RLHRPRDP 477
+S A A+ R S P S P SRR V +T+P + T P + R R
Sbjct: 345 NSPAANATAAREDAPEASIPAPAPSPPASRRSVSRTTQPSTSSFATPTEPPAKNQRKRRV 404
Query: 478 VPNRN 492
VP ++
Sbjct: 405 VPPKS 409
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 385 SRREVDHSTEPRLHNQTMTTRNPRLHRPRDPV-PNRNHNPS 504
SRR H T+P H+Q M P LH PV P+R S
Sbjct: 760 SRRH--HYTQPHPHHQQMPHHQPHLHHAHHPVHPHRGPRAS 798
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical protein
F44E2.4 protein.
Length = 1283
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 304 SQPARASPLRLQPSSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRNP 453
+QPAR +P S+S + S+ S + TEP + + T TT +P
Sbjct: 991 NQPARVTPTLETVLSSSTMVSTSSESDSESAPEQETEPTVPSTTETTESP 1040
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +1
Query: 286 PTNTDSSQPARASPLRLQP-SSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRNPRLH 462
PT + S SP R + S R +R D +++ R ++ + R
Sbjct: 42 PTISSMSSGDNKSPSRSESVSDRKRDRSRSRDRDRKKDRKKKDRSRERDRERRSSRSRSR 101
Query: 463 RPRDPVPNRNHNPSTGPPPLR 525
PRD R S PPP R
Sbjct: 102 SPRDRDRERRRRRSRSPPPRR 122
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +1
Query: 286 PTNTDSSQPARASPLRLQP-SSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRNPRLH 462
PT + S SP R + S R +R D +++ R ++ + R
Sbjct: 42 PTISSMSSGDNKSPSRSESVSDRKRDRSRSRDRDRKKDRKKKDRSRERDRERRSSRSRSR 101
Query: 463 RPRDPVPNRNHNPSTGPPPLR 525
PRD R S PPP R
Sbjct: 102 SPRDRDRERRRRRSRSPPPRR 122
>Z66520-8|CAE17837.1| 357|Caenorhabditis elegans Hypothetical
protein F49E12.12 protein.
Length = 357
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -2
Query: 251 VLVSIFALHITCLRFSLDLEGSIGGFIAISVGAVFVVSVYL 129
++VSIF + +TCL S+D++ GF+ +F VS ++
Sbjct: 182 LMVSIFGMFVTCLHHSVDMKDL--GFLVYYSLPIFGVSFFI 220
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Frame = +1
Query: 232 ANMDTRTTLAS-YE*LSTAPTNTDSSQPARASPLRLQPSSTSRPGTRDSDPGSRREVDHS 408
++ DTR+T ++ + PT++ + ++ S+TS T ++P + +E ++
Sbjct: 843 SSTDTRSTTSTIFTSSEIRPTSSITILGVESTTASSTGSTTSESTTSSTEPPTTQEESNT 902
Query: 409 TEPRLHNQTMTTRNPRLHR-----PRDPVPNRNHNPSTGPPP 519
T TT + P PVPN P+ GP P
Sbjct: 903 TTTLSSTTPFTTSSTESFTRGGFIPPIPVPNPIPKPNPGPGP 944
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Frame = +1
Query: 274 LSTAP--TNTDSSQPARASPLRLQPSSTSRPGTRDSDPGSRREV--DHSTEPRLHNQTMT 441
+ TAP +D QP+ + P + SS R R + + + +H +
Sbjct: 1275 MDTAPPQNGSDPPQPSESCPAPPKNSSKKRNNRRGNRRNTNEHIQANHEDSDSFSTSRSS 1334
Query: 442 TRNPRLHRPRDPVPNRNHNPSTGPPP 519
+ +P P P P+ + P PPP
Sbjct: 1335 SPSPPPPPPPPPPPSDDLTPVPPPPP 1360
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +1
Query: 301 SSQPARASPLRL--QPSSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRNPRLHRPRD 474
S P RASP R P +RP D REV S PR +P D
Sbjct: 228 SPPPRRASPPRRTSSPKRDARPAREIRDSREPREVRRSPPPRRAASPRKASSPSAPAKND 287
Query: 475 PVPNRNHNPSTGP 513
R+ + S P
Sbjct: 288 RKRERSPSGSVAP 300
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +1
Query: 301 SSQPARASPLRL--QPSSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRNPRLHRPRD 474
S P RASP R P +RP D REV S PR +P D
Sbjct: 228 SPPPRRASPPRRTSSPKRDARPAREIRDSREPREVRRSPPPRRAASPRKASSPSAPAKND 287
Query: 475 PVPNRNHNPSTGP 513
R+ + S P
Sbjct: 288 RKRERSPSGSVAP 300
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +1
Query: 310 PARASPLRLQPSSTSRPGTRDSDPGSRR----EVDHSTEPRLHNQTMTTRNPRLHRPRDP 477
P++A+P +++PSS P T +P + EVD + + + + + ++P
Sbjct: 322 PSKAAPKKVEPSSPVVPPTPVKNPVKKYKPPWEVDDEPAEEVKKPSAPEKKTPVLKRKEP 381
Query: 478 VPNRNHNPSTGPPP 519
P+ + PS+ P P
Sbjct: 382 EPS-STTPSSDPSP 394
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +1
Query: 301 SSQPARASPLRL--QPSSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRNPRLHRPRD 474
S P RASP R P +RP D REV S PR +P D
Sbjct: 228 SPPPRRASPPRRTSSPKRDARPAREIRDSREPREVRRSPPPRRAASPRKASSPSAPAKND 287
Query: 475 PVPNRNHNPSTGP 513
R+ + S P
Sbjct: 288 RKRERSPSGSVAP 300
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +1
Query: 301 SSQPARASPLRL--QPSSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRNPRLHRPRD 474
S P RASP R P +RP D REV S PR +P D
Sbjct: 228 SPPPRRASPPRRTSSPKRDARPAREIRDSREPREVRRSPPPRRAASPRKASSPSAPAKND 287
Query: 475 PVPNRNHNPSTGP 513
R+ + S P
Sbjct: 288 RKRERSPSGSVAP 300
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 295 TDSSQPARASPLRLQPSSTSRPGTRDSDPG-----SRREVDHSTEPRLHNQTMTTR 447
++ P +P Q ++ SRP ++ PG S R H+ +PR HN+ T R
Sbjct: 811 SEKKNPVTNNPCGGQ-NAVSRPSSKSPRPGGPSTSSHRHGSHANDPRSHNKPGTPR 865
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical protein
M142.6 protein.
Length = 1014
Score = 28.3 bits (60), Expect = 3.6
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Frame = +1
Query: 232 ANMDTRTTLASY-E*LSTAPTNTDSSQPARASPLRLQPSSTSRPGTRDSDPGSRREVDHS 408
ANM T T+ E + P + P+ P+ + S+++ T ++ G+ +D
Sbjct: 807 ANMPTEETMTMIGEMVQNRPRAPSLTAPSSNQPMNVNASASA---TVQAECGTMSVMDSI 863
Query: 409 TEP----RLHNQTMTTRNPRLHRPRDPV-----PNRNHNPSTGPPP 519
+P +HN T P + + PV P N NP+ PPP
Sbjct: 864 CQPISTSAIHNSA-TIPQPVIPMVQVPVQVPIVPAENFNPNVPPPP 908
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical protein
M142.6 protein.
Length = 1014
Score = 28.3 bits (60), Expect = 3.6
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Frame = +1
Query: 232 ANMDTRTTLASY-E*LSTAPTNTDSSQPARASPLRLQPSSTSRPGTRDSDPGSRREVDHS 408
ANM T T+ E + P + P+ P+ + S+++ T ++ G+ +D
Sbjct: 807 ANMPTEETMTMIGEMVQNRPRAPSLTAPSSNQPMNVNASASA---TVQAECGTMSVMDSI 863
Query: 409 TEP----RLHNQTMTTRNPRLHRPRDPV-----PNRNHNPSTGPPP 519
+P +HN T P + + PV P N NP+ PPP
Sbjct: 864 CQPISTSAIHNSA-TIPQPVIPMVQVPVQVPIVPAENFNPNVPPPP 908
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.3 bits (60), Expect = 3.6
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Frame = +1
Query: 277 STAPTNTDSSQPARASPLRLQPSSTSRPGT-------RDSDPGSRREVDHSTEPRLHNQT 435
S+AP S+ P + + QPS+ PGT S P S V+ S +P+
Sbjct: 63 SSAPVIASSADPILPTSVVPQPSNEPSPGTVAPSDEPSPSGPPSPGPVNPSEDPQPSGPP 122
Query: 436 MTTRNPRLHRPRDPV-PNRNHNPSTGPP 516
P+ V P+ +H PS GPP
Sbjct: 123 SPGPVDPSEDPQPSVEPSEDHQPS-GPP 149
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 3.6
Identities = 21/69 (30%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Frame = +1
Query: 319 ASPLRLQPSSTSRPGTRDSDPGSRREVDHSTEPRL---HNQTMTTRNPRLHRPRDPVPNR 489
ASP P SR G P V + PR MT +P+ PR P
Sbjct: 120 ASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPE 179
Query: 490 NHNPSTGPP 516
NP PP
Sbjct: 180 PRNPPRTPP 188
>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical
protein F20D12.2 protein.
Length = 1116
Score = 28.3 bits (60), Expect = 3.6
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = +1
Query: 169 AMKPPMDPSRSRLNRKQVM*RANMDTRTTLASYE*LSTAPTNTDSSQPARASPLRLQ-PS 345
++KPP PS + ++ ++T+ + S A + D+ + RL PS
Sbjct: 15 SVKPPTAPSAFGSTIPKPF--GSLFSKTSSLNQNTKSDAIKHGDAPASTSSLASRLTVPS 72
Query: 346 STSRP--GTRDSDPGSRREVDHSTEPRLHNQTMTTRNPRLHRPRDPVPNRNHNPST 507
++S P G+ D+ + RE + + PR N RPR+ P+ + N +T
Sbjct: 73 TSSFPLKGSGDTKVPNLREGEFAIRPRQRMIPPAGANSLFRRPREGTPDGSENRNT 128
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 313 ARASPLRLQPSSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRNP-RLHRPRDPVPNR 489
A + R S P S P SRR V +T+P + T P + R R VP +
Sbjct: 1259 AAGTAAREDAPEASIPAPAPSPPASRRSVSRTTQPSTSSFATPTEPPAKNKRMRSVVPPK 1318
Query: 490 NHNPST 507
+ S+
Sbjct: 1319 SEPASS 1324
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 4.7
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +1
Query: 136 TDTTKTAPTLMAMKPPMDPSRSRLNRKQVM*RANMDTRTTLASYE*LSTAPTNTDSSQPA 315
T TT+ + + + P P S + ++ T TT S E ST+P++T ++
Sbjct: 439 TSTTEPSTSTVTTSPSTSPVTSTVTSSS----SSSTTVTTPTSTESTSTSPSSTVTTSTT 494
Query: 316 RASPLRLQP-SSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRN 450
S P SS+S P + S S + + TT++
Sbjct: 495 APSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKS 540
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 4.7
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +1
Query: 136 TDTTKTAPTLMAMKPPMDPSRSRLNRKQVM*RANMDTRTTLASYE*LSTAPTNTDSSQPA 315
T TT+ + + + P P S + ++ T TT S E ST+P++T ++
Sbjct: 439 TSTTEPSTSTVTTSPSTSPVTSTVTSSS----SSSTTVTTPTSTESTSTSPSSTVTTSTT 494
Query: 316 RASPLRLQP-SSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRN 450
S P SS+S P + S S + + TT++
Sbjct: 495 APSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKS 540
>Z81066-7|CAB02973.1| 244|Caenorhabditis elegans Hypothetical
protein F17B5.5 protein.
Length = 244
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 382 GSRREVDHSTEPRLHNQTMTTRNPRLHRPRDPVPNRNHNP 501
G RR +D S + L + + R+ HRPR P P+R P
Sbjct: 28 GGRRRLDFS-DSSLSSSSEEHRHRPPHRPRPPRPSRPTTP 66
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 27.5 bits (58), Expect = 6.2
Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 1/144 (0%)
Frame = +1
Query: 94 LKKSPRLCPY*NR*TDTTKTAPTLMAMKPPMDPSRSRLNRKQ-VM*RANMDTRTTLASYE 270
+K L P+ T TTK ++ P++ K + ++ TL+ +
Sbjct: 289 MKMFRNLNPFDRTPTPTTKKTQSVTPSNSTPSPAKPATPTKTPTPTKKPVENNETLSQVK 348
Query: 271 *LSTAPTNTDSSQPARASPLRLQPSSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRN 450
+S A +++ S P + S + P S P + ++ +HS + T N
Sbjct: 349 TVSKALSHSPKS-PKKNSQEKSAPPSPKLPPKTTAPTPTKDGGNHSPK---------TTN 398
Query: 451 PRLHRPRDPVPNRNHNPSTGPPPL 522
L P P PNR H+PS P +
Sbjct: 399 KALEPP--PSPNRTHSPSAYQPAM 420
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 27.5 bits (58), Expect = 6.2
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1
Query: 283 APTNTDSSQPARASPLRLQPSSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRNPRLH 462
APT +++P A+ +R P + P T + P + +P + QT+ T P
Sbjct: 113 APTTIRTTRPPPATTIRTIPFVQTTPATFATLPPAPAVTRAPIQPFV-PQTVATIAPSFV 171
Query: 463 RPRDP-VPNRNHNPSTGPPPLR 525
RP+ P P R P P R
Sbjct: 172 RPQVPTAPPRVIAPQQPQQPFR 193
>AL022289-6|CAA18377.1| 244|Caenorhabditis elegans Hypothetical
protein F17B5.5 protein.
Length = 244
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 382 GSRREVDHSTEPRLHNQTMTTRNPRLHRPRDPVPNRNHNP 501
G RR +D S + L + + R+ HRPR P P+R P
Sbjct: 28 GGRRRLDFS-DSSLSSSSEEHRHRPPHRPRPPRPSRPTTP 66
>Z83235-1|CAB05775.1| 174|Caenorhabditis elegans Hypothetical
protein K10C3.2 protein.
Length = 174
Score = 27.1 bits (57), Expect = 8.2
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 277 STAPTNTDSSQPARASPLRLQPSSTSRPGT-RDSDPGSRREVDHSTEPRLHNQTMTTRNP 453
S AP T S P+ ASP+ Q T+RP + R+SD + + T P+ + + NP
Sbjct: 98 SPAPAATTPS-PS-ASPISQQ---TNRPSSDRNSDDDNLQIPRPDTVPQ---RKASIINP 149
Query: 454 RLHRPRDPVPNRNHNPSTGP 513
+H P P+ H+ + P
Sbjct: 150 SVHCKLSPAPHVQHHDAASP 169
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 27.1 bits (57), Expect = 8.2
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 274 LSTAPTNTDSSQPARASPLRLQPSSTSRPGTRDSDPGSRREVDHSTEP---RLHNQTMTT 444
+ST +NT+S + S PS R TRD + G+ + V+ + P L T+
Sbjct: 242 VSTTSSNTESYEQPSTS-----PSERPRSSTRDFENGNGKTVNPTIRPGPQELSGGIGTS 296
Query: 445 RNPRLHRPRD 474
PRL D
Sbjct: 297 SKPRLPNDAD 306
>Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 298 DSSQPARASPLRLQPSSTSRPGTRDSDPGSRREVDHSTEPRLHNQ 432
DSS+ + +R P+ST RP T P RR + L NQ
Sbjct: 260 DSSKFHGGNEIRRSPTSTHRPWTSTRGPFVRRLTFYDASQALINQ 304
>Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 298 DSSQPARASPLRLQPSSTSRPGTRDSDPGSRREVDHSTEPRLHNQ 432
DSS+ + +R P+ST RP T P RR + L NQ
Sbjct: 260 DSSKFHGGNEIRRSPTSTHRPWTSTRGPFVRRLTFYDASQALINQ 304
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
protein F40F11.2b protein.
Length = 1607
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +1
Query: 391 REVDHSTEPRLHNQTMTTRNPRLHRPRDPVPNRNHNPSTGPP 516
++ H + + N TT +HR +DP P+ + G P
Sbjct: 528 QDAPHLRQQLITNVNATTNKQMVHRSQDPTPSPGNLQQFGEP 569
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
protein F40F11.2a protein.
Length = 1593
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +1
Query: 391 REVDHSTEPRLHNQTMTTRNPRLHRPRDPVPNRNHNPSTGPP 516
++ H + + N TT +HR +DP P+ + G P
Sbjct: 514 QDAPHLRQQLITNVNATTNKQMVHRSQDPTPSPGNLQQFGEP 555
>AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein.
Length = 529
Score = 27.1 bits (57), Expect = 8.2
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +1
Query: 88 LSLKKSPRLCPY*NR*TDTTKTAPTLMAMKPPMDPSRSRLNRKQVM*RANMDTRTTLASY 267
L LKK + T T +T M + PM ++ K++ ++ + A+
Sbjct: 404 LQLKKEEKTRMQSPTPTRTPRTQKRAM-FRTPMSTAKMEPVAKKLNFDTDLPPCMSPATS 462
Query: 268 E*LS-TAPTNTDSSQPARASPLRLQPSSTSRPGTRDSDPGSRREVD----HSTEPRLHNQ 432
E +S PT + P +SP QPS++S +R + P S+R + S+ P +
Sbjct: 463 EMISFITPTRRQAVGPKTSSPKDTQPSTSS--SSRTTTPMSKRAMTPSSIASSTPSSAKK 520
Query: 433 TMTTRN 450
+T RN
Sbjct: 521 VLTRRN 526
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 27.1 bits (57), Expect = 8.2
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 313 ARASPLRLQPSSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRNP-RLHRPRDPVPNR 489
A + R S P S P SRR V +T+P + T P + R R VP +
Sbjct: 1243 AAGTAAREDAPEASIPVPAPSPPASRRSVSRTTQPSTSSFATPTEPPAKNKRMRSVVPPK 1302
Query: 490 NHNPST 507
+ S+
Sbjct: 1303 SEPASS 1308
>AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle
defective protein 1 protein.
Length = 529
Score = 27.1 bits (57), Expect = 8.2
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +1
Query: 88 LSLKKSPRLCPY*NR*TDTTKTAPTLMAMKPPMDPSRSRLNRKQVM*RANMDTRTTLASY 267
L LKK + T T +T M + PM ++ K++ ++ + A+
Sbjct: 404 LQLKKEEKTRMQSPTPTRTPRTQKRAM-FRTPMSTAKMEPVAKKLNFDTDLPPCMSPATS 462
Query: 268 E*LS-TAPTNTDSSQPARASPLRLQPSSTSRPGTRDSDPGSRREVD----HSTEPRLHNQ 432
E +S PT + P +SP QPS++S +R + P S+R + S+ P +
Sbjct: 463 EMISFITPTRRQAVGPKTSSPKDTQPSTSS--SSRTTTPMSKRAMTPSSIASSTPSSAKK 520
Query: 433 TMTTRN 450
+T RN
Sbjct: 521 VLTRRN 526
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,650,283
Number of Sequences: 27780
Number of extensions: 261432
Number of successful extensions: 1190
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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