Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2433
         (455 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC043207-1|AAH43207.2|  559|Homo sapiens ADAM7 protein protein.        29   5.7  
AF215824-1|AAG43987.1|  754|Homo sapiens a disintegrin and metal...    29   5.7  
AF090327-1|AAC36742.1|  588|Homo sapiens sperm maturation-relate...    29   5.7  
BC094885-1|AAH94885.1| 1202|Homo sapiens USP52 protein protein.        29   10.0 
BC024043-1|AAH24043.1| 1198|Homo sapiens ubiquitin specific pept...    29   10.0 
AB107585-1|BAD02263.1| 1198|Homo sapiens PABP1-DEPENDENT POLY(A)...    29   10.0 
AB014610-1|BAA31685.2| 1206|Homo sapiens KIAA0710 protein protein.     29   10.0 

>BC043207-1|AAH43207.2|  559|Homo sapiens ADAM7 protein protein.
          Length = 559

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
 Frame = -3

Query: 177 MNGSWIFCMCE--VYPGGVCNPSFCVCV*YRLKNGAG-VSNHMWHRLKNDDG---DDKPC 16
           ++G W++   +   YPGG+C P +   +   L      ++N M H+L ++ G   D+ PC
Sbjct: 106 LSGKWLYSHVQGISYPGGMCLPYYSTSIIKDLLPDTNIIANRMAHQLGHNLGMQHDEFPC 165


>AF215824-1|AAG43987.1|  754|Homo sapiens a disintegrin and
           metalloproteinase 7 protein.
          Length = 754

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
 Frame = -3

Query: 177 MNGSWIFCMCE--VYPGGVCNPSFCVCV*YRLKNGAG-VSNHMWHRLKNDDG---DDKPC 16
           ++G W++   +   YPGG+C P +   +   L      ++N M H+L ++ G   D+ PC
Sbjct: 291 LSGKWLYSHVQGISYPGGMCLPYYSTSIIKDLLPDTNIIANRMAHQLGHNLGMQHDEFPC 350


>AF090327-1|AAC36742.1|  588|Homo sapiens sperm maturation-related
           glycoprotein GP-83 protein.
          Length = 588

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
 Frame = -3

Query: 177 MNGSWIFCMCE--VYPGGVCNPSFCVCV*YRLKNGAG-VSNHMWHRLKNDDG---DDKPC 16
           ++G W++   +   YPGG+C P +   +   L      ++N M H+L ++ G   D+ PC
Sbjct: 125 LSGKWLYSHVQGISYPGGMCLPYYSTSIIKDLLPDTNIIANRMAHQLGHNLGMQHDEFPC 184


>BC094885-1|AAH94885.1| 1202|Homo sapiens USP52 protein protein.
          Length = 1202

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 56  HIWFDTPAPFFNRYHTQTQ 112
           H+W D+P P FN Y  +T+
Sbjct: 355 HLWTDSPEPSFNPYSRETE 373


>BC024043-1|AAH24043.1| 1198|Homo sapiens ubiquitin specific
           peptidase 52 protein.
          Length = 1198

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 56  HIWFDTPAPFFNRYHTQTQ 112
           H+W D+P P FN Y  +T+
Sbjct: 355 HLWTDSPEPSFNPYSRETE 373


>AB107585-1|BAD02263.1| 1198|Homo sapiens PABP1-DEPENDENT
           POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN2 protein.
          Length = 1198

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 56  HIWFDTPAPFFNRYHTQTQ 112
           H+W D+P P FN Y  +T+
Sbjct: 355 HLWTDSPEPSFNPYSRETE 373


>AB014610-1|BAA31685.2| 1206|Homo sapiens KIAA0710 protein protein.
          Length = 1206

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 56  HIWFDTPAPFFNRYHTQTQ 112
           H+W D+P P FN Y  +T+
Sbjct: 360 HLWTDSPEPSFNPYSRETE 378


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,788,745
Number of Sequences: 237096
Number of extensions: 1161269
Number of successful extensions: 3614
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3614
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)