Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2431
(681 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 121 8e-28
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 113 2e-25
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 112 4e-25
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 112 4e-25
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 108 6e-24
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 108 6e-24
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 107 2e-23
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 105 4e-23
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 105 6e-23
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 101 9e-22
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 101 9e-22
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 101 9e-22
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 101 9e-22
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 101 9e-22
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 100 2e-21
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 98 1e-20
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 94 1e-19
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 94 1e-19
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 94 1e-19
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 94 1e-19
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 87 2e-17
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 68 1e-11
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 51 2e-06
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 42 6e-04
AY069347-1|AAL39492.1| 396|Drosophila melanogaster LD05576p pro... 32 0.83
AE014134-3030|AAF53752.1| 396|Drosophila melanogaster CG10495-P... 32 0.83
AY052073-1|AAK93497.1| 860|Drosophila melanogaster SD02969p pro... 26 4.0
AY060288-1|AAL25327.1| 701|Drosophila melanogaster GH13047p pro... 29 7.8
AE014296-2593|AAF49569.3| 861|Drosophila melanogaster CG6114-PA... 29 7.8
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 121 bits (292), Expect = 8e-28
Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 8/188 (4%)
Frame = +3
Query: 30 NFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVW 209
+ ++ + IL D QFGFR HS V+QVHRLT+HIL + + Y A+F D+ + FD+VW
Sbjct: 537 DIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKE--YCNAVFIDMQQAFDRVW 594
Query: 210 HNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXX 389
H+GLI K+ + P +++ +L +R F RV + S PR + AGVPQG
Sbjct: 595 HDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYS 653
Query: 390 XXXNDIPRSPPTH--------LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWR 545
D+P H LA +ADD + YSS + A+ LQ L W ++W
Sbjct: 654 VFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWI 713
Query: 546 IDINPAKS 569
+ +NP K+
Sbjct: 714 LKVNPQKT 721
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 113 bits (272), Expect = 2e-25
Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 5/190 (2%)
Frame = +3
Query: 30 NFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVW 209
+ + ++GI + QFGFR H V+Q+HR+ E IL + + Y +LF D+ + FD+VW
Sbjct: 536 SIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTAYDSKE--YCNSLFLDIREAFDRVW 593
Query: 210 HNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXX 389
H GL K+ +P +++ +L R F R S+ + AGVPQG
Sbjct: 594 HIGLQLKI-KQTLPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYC 652
Query: 390 XXXNDIPRSP-----PTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 554
+D+P+ + LA FADD V Y SR + A +Q A +W R+W I I
Sbjct: 653 LYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGI 712
Query: 555 NPAKSTAVLF 584
N +KS V F
Sbjct: 713 NSSKSNNVCF 722
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 112 bits (270), Expect = 4e-25
Identities = 61/184 (33%), Positives = 99/184 (53%)
Frame = +3
Query: 33 FVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWH 212
F+ L Q+GFR + + +L +I + + + G + D+ FD VWH
Sbjct: 562 FLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWH 619
Query: 213 NGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXX 392
+GL+ KL +G P L+ I+++FL++R F + ++S+ R L AGVPQG
Sbjct: 620 DGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNI 679
Query: 393 XXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKST 572
+DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP K+
Sbjct: 680 FTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTN 739
Query: 573 AVLF 584
A+ F
Sbjct: 740 AIFF 743
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 112 bits (270), Expect = 4e-25
Identities = 61/184 (33%), Positives = 99/184 (53%)
Frame = +3
Query: 33 FVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWH 212
F+ L Q+GFR + + +L +I + + + G + D+ FD VWH
Sbjct: 510 FLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWH 567
Query: 213 NGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXX 392
+GL+ KL +G P L+ I+++FL++R F + ++S+ R L AGVPQG
Sbjct: 568 DGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNI 627
Query: 393 XXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKST 572
+DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP K+
Sbjct: 628 FTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTN 687
Query: 573 AVLF 584
A+ F
Sbjct: 688 AIFF 691
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 108 bits (260), Expect = 6e-24
Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR H +Q+HR+ L + + Y F D+ + FD+VWH GL++K +
Sbjct: 550 QFGFRLQHGTPEQLHRVVNFALEAMENKE--YAVGAFLDIQQAFDRVWHPGLLYKAKRL- 606
Query: 246 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 425
P L L+++ FL R+F V+G +SS +P+ AGVPQG +D+P P
Sbjct: 607 FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPV 666
Query: 426 H--------LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 581
+A +ADDT V S++ LQ A QW W + IN K V
Sbjct: 667 TEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVT 726
Query: 582 F 584
F
Sbjct: 727 F 727
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 108 bits (260), Expect = 6e-24
Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR H +Q+HR+ L + + Y F D+ + FD+VWH GL++K +
Sbjct: 352 QFGFRLQHGTPEQLHRVVNFALEAMENKE--YAVGAFLDIQQAFDRVWHPGLLYKAKRL- 408
Query: 246 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 425
P L L+++ FL R+F V+G +SS +P+ AGVPQG +D+P P
Sbjct: 409 FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPV 468
Query: 426 H--------LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 581
+A +ADDT V S++ LQ A QW W + IN K V
Sbjct: 469 TEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVT 528
Query: 582 F 584
F
Sbjct: 529 F 529
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 107 bits (256), Expect = 2e-23
Identities = 58/178 (32%), Positives = 91/178 (51%)
Frame = +3
Query: 51 ILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFK 230
I+ QFGFR +H ++QV+R+T I + Y A+F DV++ FDKVW +GL+FK
Sbjct: 541 IIPAHQFGFRESHGTIEQVNRITTEIRTAFEYRE--YCTAVFLDVSQAFDKVWLDGLMFK 598
Query: 231 LFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 410
+ + +P+S +++ +L +R F R S+ + AGVPQG DIP
Sbjct: 599 I-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIP 657
Query: 411 RSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 584
+ ++ FADDT + SR+ +L + + +W WRI +N K V F
Sbjct: 658 TNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTF 715
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 105 bits (253), Expect = 4e-23
Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR H QQ+ R+T+ IL R + Y A+F D+++ FD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGSEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 246 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 410
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYI 709
Query: 411 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 578
R PT L+ +ADDT V S + + ++ + W KW I +N AK+ V
Sbjct: 710 YRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGHV 769
Query: 579 LF 584
+F
Sbjct: 770 IF 771
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 105 bits (252), Expect = 6e-23
Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 9/182 (4%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR H QQ+ R+T+ IL R + Y A+F D+++ FD+VWH GL+ KL +
Sbjct: 605 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 661
Query: 246 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 410
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 662 LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYI 721
Query: 411 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 578
R PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 722 YRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 781
Query: 579 LF 584
+F
Sbjct: 782 IF 783
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 101 bits (242), Expect = 9e-22
Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR H QQ+ R+T+ IL R + Y A+F D+++ FD+VWH GL+ KL +
Sbjct: 477 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 533
Query: 246 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 410
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 534 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 593
Query: 411 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 578
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 594 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 653
Query: 579 LF 584
++
Sbjct: 654 IY 655
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 101 bits (242), Expect = 9e-22
Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR H QQ+ R+T+ IL R + Y A+F D+++ FD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 246 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 410
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 411 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 578
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 769
Query: 579 LF 584
++
Sbjct: 770 IY 771
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 101 bits (242), Expect = 9e-22
Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR H QQ+ R+T+ IL R + Y A+F D+++ FD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 246 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 410
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 411 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 578
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 769
Query: 579 LF 584
++
Sbjct: 770 IY 771
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 101 bits (242), Expect = 9e-22
Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR H QQ+ R+T+ IL R + Y A+F D+++ FD+VWH GL+ KL +
Sbjct: 555 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 611
Query: 246 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 410
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 612 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 671
Query: 411 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 578
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 672 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 731
Query: 579 LF 584
++
Sbjct: 732 IY 733
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 101 bits (242), Expect = 9e-22
Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR H QQ+ R+T+ IL R + Y A+F D+++ FD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 246 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 410
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 411 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 578
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 769
Query: 579 LF 584
++
Sbjct: 770 IY 771
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 100 bits (239), Expect = 2e-21
Identities = 56/173 (32%), Positives = 83/173 (47%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR H ++QV+R+T I + Y A+F DVA+ FD+VW +GL+FK+ +
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHRE--YCTAIFLDVAQAFDRVWLDGLLFKIIKL- 600
Query: 246 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 425
+P + +++ +L NR F R + + S + AGVPQG D P
Sbjct: 601 LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNL 660
Query: 426 HLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 584
+ FADDT + S+ L ++ +W WRI IN K V F
Sbjct: 661 TTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF 713
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 97.9 bits (233), Expect = 1e-20
Identities = 55/173 (31%), Positives = 82/173 (47%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR H ++QV+R+T I + Y A+F DVA+ FD+VW +GL+FK+ +
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHRE--YCTAIFLDVAQAFDRVWLDGLLFKIIKL- 600
Query: 246 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 425
+P + +++ +L N F R + + S + AGVPQG D P
Sbjct: 601 LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNL 660
Query: 426 HLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 584
+ FADDT + S+ L ++ +W WRI IN K V F
Sbjct: 661 TTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF 713
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 94.3 bits (224), Expect = 1e-19
Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 17/190 (8%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR +H Q+ R+T+ IL + A F D+ + FD+VWH+GL++KL +
Sbjct: 149 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 205
Query: 246 VPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 410
+P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 206 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 265
Query: 411 -------RSPPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 554
P H LA +ADDT + S+ L Q+ +W +KW I I
Sbjct: 266 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 325
Query: 555 NPAKSTAVLF 584
N K+ +LF
Sbjct: 326 NAKKTGHILF 335
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 94.3 bits (224), Expect = 1e-19
Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 17/190 (8%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR +H Q+ R+T+ IL + A F D+ + FD+VWH+GL++KL +
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 652
Query: 246 VPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 410
+P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 712
Query: 411 -------RSPPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 554
P H LA +ADDT + S+ L Q+ +W +KW I I
Sbjct: 713 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 772
Query: 555 NPAKSTAVLF 584
N K+ +LF
Sbjct: 773 NAKKTGHILF 782
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 94.3 bits (224), Expect = 1e-19
Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 17/190 (8%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR +H Q+ R+T+ IL + A F D+ + FD+VWH+GL++KL +
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 652
Query: 246 VPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 410
+P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 712
Query: 411 -------RSPPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 554
P H LA +ADDT + S+ L Q+ +W +KW I I
Sbjct: 713 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 772
Query: 555 NPAKSTAVLF 584
N K+ +LF
Sbjct: 773 NAKKTGHILF 782
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 94.3 bits (224), Expect = 1e-19
Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 17/190 (8%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QFGFR +H Q+ R+T+ IL + A F D+ + FD+VWH+GL++KL +
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 652
Query: 246 VPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 410
+P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 712
Query: 411 -------RSPPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 554
P H LA +ADDT + S+ L Q+ +W +KW I I
Sbjct: 713 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 772
Query: 555 NPAKSTAVLF 584
N K+ +LF
Sbjct: 773 NAKKTGHILF 782
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 87.4 bits (207), Expect = 2e-17
Identities = 47/136 (34%), Positives = 70/136 (51%)
Frame = +3
Query: 66 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHNGLIFKLFNMG 245
QF F H ++QV+R+T I + Y ALF DVA+ FD+VW +GL+FK+ +
Sbjct: 85 QFDFPAKHGAIEQVNRITTEIRTAFEHRE--YCTALFLDVAQAFDRVWLDGLMFKIIQL- 141
Query: 246 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 425
+P ++ +++ +L R F R + SS + AGVPQG DIP +
Sbjct: 142 LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQL 201
Query: 426 HLALFADDTTVYYSSR 473
+ FADDT + SR
Sbjct: 202 TIFTFADDTAIISRSR 217
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 67.7 bits (158), Expect = 1e-11
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 4/170 (2%)
Frame = +3
Query: 33 FVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWH 212
F+ ++ Q F++NHS + + R+ L+ + L D + FD+V
Sbjct: 537 FIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNALSTKN--HVSILATDFERAFDRVGI 594
Query: 213 NGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXX 392
+ ++ +L G+ L +I+ F++NRSFR R+ S+ L G+PQG
Sbjct: 595 HAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMI 654
Query: 393 XXNDI----PRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQW 530
DI R +++L+ADD ++ +N + + +K + W
Sbjct: 655 AIEDINDIVTRHKDIYISLYADDAIIFTKIKNINTVREKFLEILQEINSW 704
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 50.8 bits (116), Expect = 2e-06
Identities = 32/109 (29%), Positives = 56/109 (51%)
Frame = +3
Query: 36 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKTFDKVWHN 215
V+ ++ D+QFGF+ S + L L+ ++ ++T + D ++ FD+V +
Sbjct: 533 VTYNNLINDKQFGFKKGKSTSDCL--LYVDYLITKSK---MHTSLVTLDFSRAFDRVGVH 587
Query: 216 GLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 362
+I +L ++ I++F+SNR RV SSP PL G+PQG
Sbjct: 588 SIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQG 636
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 42.3 bits (95), Expect = 6e-04
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 9/182 (4%)
Frame = +3
Query: 63 EQFGFRTNHSCVQQVHRLTEHILVGLNRPKPL-----YTGALFFDVAKTFDKVWHNGLIF 227
+Q+GFR S + + +T+ L+ + L Y + DV F+ ++
Sbjct: 513 QQYGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILG 572
Query: 228 KLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXN- 401
+ N+GVPD + +I ++ +R Y E G RS ++AGVPQG +
Sbjct: 573 AMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRS--HQVSAGVPQGSVLGPILWNIMYDG 630
Query: 402 --DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTA 575
I + L FADD + ++ + A A +W K + I K+
Sbjct: 631 ILSISKPRGVELHCFADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEV 690
Query: 576 VL 581
VL
Sbjct: 691 VL 692
>AY069347-1|AAL39492.1| 396|Drosophila melanogaster LD05576p
protein.
Length = 396
Score = 31.9 bits (69), Expect = 0.83
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -3
Query: 316 PSTRYRKERFDKKSRMMSTRLSGTPMLNSLKIKPLCQTLSNVFATSKKRAPVYNGFGRLS 137
P RY K F + R+ +L+ TPM+ S I + N F+T P+ F
Sbjct: 29 PMVRYSKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQNEFSTGADDQPLIAQFAAKD 88
Query: 136 PT 131
PT
Sbjct: 89 PT 90
>AE014134-3030|AAF53752.1| 396|Drosophila melanogaster CG10495-PA
protein.
Length = 396
Score = 31.9 bits (69), Expect = 0.83
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -3
Query: 316 PSTRYRKERFDKKSRMMSTRLSGTPMLNSLKIKPLCQTLSNVFATSKKRAPVYNGFGRLS 137
P RY K F + R+ +L+ TPM+ S I + N F+T P+ F
Sbjct: 29 PMVRYSKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQNEFSTGADDQPLIAQFAAKD 88
Query: 136 PT 131
PT
Sbjct: 89 PT 90
>AY052073-1|AAK93497.1| 860|Drosophila melanogaster SD02969p
protein.
Length = 860
Score = 26.2 bits (55), Expect(2) = 4.0
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -3
Query: 382 RRGERTEPCGTPA-VRGRGEERVPSTRYRK-ERFDKKSRMMSTRLSGTPMLNSLKIKPLC 209
R+GE+ G P+ R + V +T K ++ +K +++ LSG L K+KPL
Sbjct: 468 RKGEQIANSGVPSHSRTKIVVSVDATLAHKLKQMEKSAKIDEDTLSGLKELEIGKLKPLP 527
Query: 208 QTLSNVFATSKK 173
+ N T ++
Sbjct: 528 SSSKNPVLTHRR 539
Score = 21.8 bits (44), Expect(2) = 4.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 82 VRNPNCSSMRMPLDETK 32
+R P+CSS D+TK
Sbjct: 545 IRTPSCSSSEASDDDTK 561
>AY060288-1|AAL25327.1| 701|Drosophila melanogaster GH13047p
protein.
Length = 701
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -2
Query: 644 GGCEIPPPNTGGNPCG---ASPLKEHRSTFRWVDVYAPFSEP 528
G C IPP + GGN G ASP HR+ + F +P
Sbjct: 358 GDCGIPPGSPGGNSSGSTSASPSVHHRANSGPTIAISMFHDP 399
>AE014296-2593|AAF49569.3| 861|Drosophila melanogaster CG6114-PA
protein.
Length = 861
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -2
Query: 644 GGCEIPPPNTGGNPCG---ASPLKEHRSTFRWVDVYAPFSEP 528
G C IPP + GGN G ASP HR+ + F +P
Sbjct: 518 GDCGIPPGSPGGNSSGSTSASPSVHHRANSGPTIAISMFHDP 559
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,788,807
Number of Sequences: 53049
Number of extensions: 759431
Number of successful extensions: 2425
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2388
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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