Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2427
         (555 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058605-1|AAL13834.1|  585|Drosophila melanogaster LD29807p pro...    31   1.4  
AE014134-1406|AAF52606.2|  585|Drosophila melanogaster CG8668-PA...    31   1.4  
AF181622-1|AAD55408.1|  694|Drosophila melanogaster BcDNA.GH0234...    30   2.4  
AE014296-481|AAF47665.1|  694|Drosophila melanogaster CG12182-PA...    30   2.4  
BT003477-1|AAO39480.1|  977|Drosophila melanogaster RE60364p pro...    29   5.6  
AE014298-913|AAF46177.2|  977|Drosophila melanogaster CG3973-PA ...    29   5.6  
AY071284-1|AAL48906.1|  225|Drosophila melanogaster RE31184p pro...    28   9.7  
AE014296-2998|AAF49279.1|  225|Drosophila melanogaster CG7354-PA...    28   9.7  

>AY058605-1|AAL13834.1|  585|Drosophila melanogaster LD29807p
           protein.
          Length = 585

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 206 PETMVVSRSDDAETEATLDVDTVTEGPVQPIKLTKMDVKS 325
           PE+ V+    +A+ EA + +    + PV P+K TK  V S
Sbjct: 264 PESKVIQEIKEAKKEAAVPLPKSAKPPVPPVKTTKSKVPS 303


>AE014134-1406|AAF52606.2|  585|Drosophila melanogaster CG8668-PA
           protein.
          Length = 585

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 206 PETMVVSRSDDAETEATLDVDTVTEGPVQPIKLTKMDVKS 325
           PE+ V+    +A+ EA + +    + PV P+K TK  V S
Sbjct: 264 PESKVIQEIKEAKKEAAVPLPKSAKPPVPPVKTTKSKVPS 303


>AF181622-1|AAD55408.1|  694|Drosophila melanogaster BcDNA.GH02340
           protein.
          Length = 694

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/43 (25%), Positives = 27/43 (62%)
 Frame = +2

Query: 266 DTVTEGPVQPIKLTKMDVKSVISMRYAHTAIVAHVRNAANKSQ 394
           DT TEG +Q +++    +++VI ++ +H  +  H++ + ++ Q
Sbjct: 503 DTATEGQLQQLQIKFHVLQNVIRLQSSHLQLTVHIQKSRDELQ 545


>AE014296-481|AAF47665.1|  694|Drosophila melanogaster CG12182-PA
           protein.
          Length = 694

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/43 (25%), Positives = 27/43 (62%)
 Frame = +2

Query: 266 DTVTEGPVQPIKLTKMDVKSVISMRYAHTAIVAHVRNAANKSQ 394
           DT TEG +Q +++    +++VI ++ +H  +  H++ + ++ Q
Sbjct: 503 DTATEGQLQQLQIKFHVLQNVIRLQSSHLQLTVHIQKSRDELQ 545


>BT003477-1|AAO39480.1|  977|Drosophila melanogaster RE60364p
           protein.
          Length = 977

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = +2

Query: 194 TITTPETMVVSRSDDAETEATLDVDTVTEGPVQPIKLTKMDVKSVISM 337
           T TT ET +   SDD+ETE   D + V     QP  +T  D+KS+  M
Sbjct: 214 TTTTVETDLYDDSDDSETEDDGDQNPVLMYGPQPQIITN-DLKSLDEM 260


>AE014298-913|AAF46177.2|  977|Drosophila melanogaster CG3973-PA
           protein.
          Length = 977

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = +2

Query: 194 TITTPETMVVSRSDDAETEATLDVDTVTEGPVQPIKLTKMDVKSVISM 337
           T TT ET +   SDD+ETE   D + V     QP  +T  D+KS+  M
Sbjct: 214 TTTTVETDLYDDSDDSETEDDGDQNPVLMYGPQPQIITN-DLKSLDEM 260


>AY071284-1|AAL48906.1|  225|Drosophila melanogaster RE31184p
           protein.
          Length = 225

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 17/80 (21%), Positives = 32/80 (40%)
 Frame = +2

Query: 179 VVHAATITTPETMVVSRSDDAETEATLDVDTVTEGPVQPIKLTKMDVKSVISMRYAHTAI 358
           V H  T T    ++    ++AE +  LD +      +   +  ++  K    + Y    +
Sbjct: 85  VRHEETSTADHIVLTPEQEEAEFQKCLDANAAWNAAIAKERDQRLAKKREEKVAYIQERL 144

Query: 359 VAHVRNAANKSQEANFRVLL 418
            A       + ++AN RVLL
Sbjct: 145 EAQQLREEERKEQANQRVLL 164


>AE014296-2998|AAF49279.1|  225|Drosophila melanogaster CG7354-PA
           protein.
          Length = 225

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 17/80 (21%), Positives = 32/80 (40%)
 Frame = +2

Query: 179 VVHAATITTPETMVVSRSDDAETEATLDVDTVTEGPVQPIKLTKMDVKSVISMRYAHTAI 358
           V H  T T    ++    ++AE +  LD +      +   +  ++  K    + Y    +
Sbjct: 85  VRHEETSTADHIVLTPEQEEAEFQKCLDANAAWNAAIAKERDQRLAKKREEKVAYIQERL 144

Query: 359 VAHVRNAANKSQEANFRVLL 418
            A       + ++AN RVLL
Sbjct: 145 EAQQLREEERKEQANQRVLL 164


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,332,803
Number of Sequences: 53049
Number of extensions: 503142
Number of successful extensions: 1270
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)