Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2427
(555 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical ... 28 3.9
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 27 6.9
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 27 6.9
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 27 6.9
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 27 6.9
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 27 6.9
U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z93393-11|CAB07698.2| 536|Caenorhabditis elegans Hypothetical p... 27 9.1
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF088285-1|AAC98292.1| 536|Caenorhabditis elegans caspase-relat... 27 9.1
>AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical
protein W08E12.2 protein.
Length = 120
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 271 SNGGTCSTNKTDEDGCEVRDIYAIRSHGYCSAC 369
+N CS N + GC R Y + GY S C
Sbjct: 60 NNNNGCSCNPCNGGGCAPRCSYCPNNFGYSSCC 92
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 145 LNFIREHWSPVCGTCCHNYDP 207
LN +++ W P C TC H P
Sbjct: 584 LNALQKKWHPTCFTCAHCQKP 604
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
T11B7.4d protein.
Length = 1424
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 145 LNFIREHWSPVCGTCCHNYDP 207
LN +++ W P C TC H P
Sbjct: 1324 LNALQKKWHPTCFTCAHCQKP 1344
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 145 LNFIREHWSPVCGTCCHNYDP 207
LN +++ W P C TC H P
Sbjct: 671 LNALQKKWHPTCFTCAHCQKP 691
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 145 LNFIREHWSPVCGTCCHNYDP 207
LN +++ W P C TC H P
Sbjct: 545 LNALQKKWHPTCFTCAHCQKP 565
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 145 LNFIREHWSPVCGTCCHNYDP 207
LN +++ W P C TC H P
Sbjct: 584 LNALQKKWHPTCFTCAHCQKP 604
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 145 LNFIREHWSPVCGTCCHNYDP 207
LN +++ W P C TC H P
Sbjct: 1324 LNALQKKWHPTCFTCAHCQKP 1344
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 145 LNFIREHWSPVCGTCCHNYDP 207
LN +++ W P C TC H P
Sbjct: 671 LNALQKKWHPTCFTCAHCQKP 691
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 145 LNFIREHWSPVCGTCCHNYDP 207
LN +++ W P C TC H P
Sbjct: 545 LNALQKKWHPTCFTCAHCQKP 565
>U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical
protein C49C8.5 protein.
Length = 451
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Frame = +1
Query: 208 RDHGGIQIG*CGN*SNARCRYSNGGTCSTNKTDED---GCEVRDIYAIRSHGY 357
+ +GG G CGN N +N G CS K D G +R + GY
Sbjct: 368 KGYGGWWYGSCGNNLNGFLYPNNNGDCSVTKFDSTLLLGINMRTTTGTATGGY 420
>Z93393-11|CAB07698.2| 536|Caenorhabditis elegans Hypothetical
protein Y48E1B.13a protein.
Length = 536
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 171 RPMLPNKIKSCRFSDIVTVLLIFNGTI 91
+P+LPN I++C F + + +I+ I
Sbjct: 125 QPLLPNAIQTCEFDEETMIRMIYGAGI 151
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 67 QSLKTN*INRSIENKQNSNNVAKAAALNFIREHWSP 174
Q LKTN + + + N+ + A+ A L+ +W P
Sbjct: 4343 QHLKTNTVKQKLHNRSLKQDHARVALLDSDARYWDP 4378
>AF088285-1|AAC98292.1| 536|Caenorhabditis elegans caspase-related
protein 1A protein.
Length = 536
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 171 RPMLPNKIKSCRFSDIVTVLLIFNGTI 91
+P+LPN I++C F + + +I+ I
Sbjct: 125 QPLLPNAIQTCEFDEETMIRMIYGAGI 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,313,653
Number of Sequences: 27780
Number of extensions: 249609
Number of successful extensions: 706
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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