Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2425
(462 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellu... 102 4e-21
UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishma... 91 8e-18
UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreoc... 69 7e-11
UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiell... 62 4e-09
UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|R... 62 4e-09
UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archa... 58 1e-07
UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo... 57 2e-07
UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultu... 55 9e-07
UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole ge... 43 0.004
UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.080
UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; ... 38 0.14
UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul... 38 0.14
UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15; Bacter... 37 0.24
UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacter... 36 0.43
UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular or... 35 0.75
UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3; ... 35 0.99
UniRef50_Q8ZU26 Cluster: Sua5 family protein; n=7; Thermoprotei|... 34 1.3
UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu... 34 1.3
UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus ... 34 1.7
UniRef50_Q1YJV9 Cluster: Putative ATPase, PP-loop superfamily im... 33 4.0
UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu... 32 7.0
UniRef50_Q18FW5 Cluster: Putative uncharacterized protein; n=1; ... 31 9.2
>UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellular
organisms|Rep: 40S ribosomal protein S14 - Homo sapiens
(Human)
Length = 151
Score = 102 bits (244), Expect = 4e-21
Identities = 51/85 (60%), Positives = 60/85 (70%)
Frame = -2
Query: 458 GEPVFGEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPE 279
GE VFG HIFASFNDT VHVT+L +ETI VTGGMKVK R+++SPYA ML AQ+V +
Sbjct: 24 GENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQ 83
Query: 278 KCKTLGITALAHKAPCYW*KQNKDP 204
+CK LGITAL K + K P
Sbjct: 84 RCKELGITALHIKLRATGGNRTKTP 108
Score = 40.3 bits (90), Expect = 0.020
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = -1
Query: 198 PGAQXXXXXXXXXSMKIXRIEDVTPVPSDST 106
PGAQ MKI RIEDVTP+PSDST
Sbjct: 110 PGAQSALRALARSGMKIGRIEDVTPIPSDST 140
Score = 39.1 bits (87), Expect = 0.046
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -3
Query: 280 KNAKLLA*RPLHIKLRATGENKTKTPGP 197
+ K L LHIKLRATG N+TKTPGP
Sbjct: 83 QRCKELGITALHIKLRATGGNRTKTPGP 110
>UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishmania
major|Rep: 40S ribosomal protein S14 - Leishmania major
Length = 203
Score = 91.5 bits (217), Expect = 8e-18
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = -2
Query: 458 GEPVFGEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPE 279
G+ V+G HIFASFNDT VHVT++ RET VTGGMKVK R+++SPYA M+ AQ+V
Sbjct: 26 GDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADRDESSPYAAMMAAQDVVA 85
Query: 278 KCKTLGITALAHKAPCYW*KQNKDP 204
+CK GI AL K + K P
Sbjct: 86 RCKECGINALHVKMRAVGGVRTKSP 110
Score = 46.8 bits (106), Expect = 2e-04
Identities = 23/54 (42%), Positives = 31/54 (57%)
Frame = -3
Query: 250 LHIKLRATGENKTKTPGPWCSVCTSGSCSFKYEDXPH*RCHPRTIRLDP*EGWP 89
LH+K+RA G +TK+PGP + + ED PH CHP RL P +G+P
Sbjct: 95 LHVKMRAVGGVRTKSPGPGRPGRPPRARPRRDEDWPHRGCHPDPDRLHPPQGFP 148
>UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S14 -
Ostreococcus tauri
Length = 243
Score = 68.5 bits (160), Expect = 7e-11
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = -2
Query: 401 HVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCKTLGITALAHKAPCYW* 222
HVT+L +ET++ TGGMKVK R+++SPYA ML AQ+V +CK LGITAL K
Sbjct: 90 HVTDLSGKETLSRCTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKMRAKGG 149
Query: 221 KQNKDP 204
+ K P
Sbjct: 150 NKTKSP 155
Score = 37.9 bits (84), Expect = 0.11
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -2
Query: 458 GEPVFGEAHIFASFNDTLVHVTNLPARETIA 366
GE VFG AHIFASFNDT V V P+ IA
Sbjct: 26 GELVFGVAHIFASFNDTFV-VRESPSERMIA 55
Score = 35.1 bits (77), Expect = 0.75
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3
Query: 250 LHIKLRATGENKTKTPGP 197
LHIK+RA G NKTK+PGP
Sbjct: 140 LHIKMRAKGGNKTKSPGP 157
Score = 34.7 bits (76), Expect = 0.99
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -1
Query: 198 PGAQXXXXXXXXXSMKIXRIEDVTPVPSDST 106
PG Q +KI RIEDVTP P+DST
Sbjct: 157 PGGQSALRALSRSGIKIGRIEDVTPTPTDST 187
>UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiella
natans|Rep: Ribosomal protein S14 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 145
Score = 62.5 bits (145), Expect = 4e-09
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = -2
Query: 449 VFGEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCK 270
+FG HI ++ NDT++HVT++ ETI+ ++ G+ ++K S Y ML Q V CK
Sbjct: 11 LFGILHILSTKNDTIIHVTDITGSETISRISSGIVATNGKDKKSNYCAMLATQKVSNVCK 70
Query: 269 TLGITAL 249
LGI AL
Sbjct: 71 VLGINAL 77
>UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|Rep:
Ribosomal protein S14 - Palaemonetes pugio
Length = 77
Score = 62.5 bits (145), Expect = 4e-09
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2
Query: 458 GEPVFGEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKAS 318
GE VF HI+AS+NDT VHVT+L RETI VTGG KVK R+++S
Sbjct: 24 GENVFAVCHIYASYNDTFVHVTDLSGRETIIRVTGGQKVKADRDESS 70
>UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15;
Archaea|Rep: 30S ribosomal protein S11P - Methanococcus
jannaschii
Length = 129
Score = 57.6 bits (133), Expect = 1e-07
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = -2
Query: 446 FGEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCKT 267
+G HI++S+N+T++H T++ ETIA V+GG + R++ SPYA M A + E K
Sbjct: 9 WGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSPYAAMQAAFKLAEVLKE 68
Query: 266 LGI 258
GI
Sbjct: 69 RGI 71
Score = 34.7 bits (76), Expect = 0.99
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -1
Query: 198 PGAQXXXXXXXXXSMKIXRIEDVTPVPSDST 106
PGAQ ++I RIEDVTPVP D T
Sbjct: 91 PGAQAAIRALARAGLRIGRIEDVTPVPHDGT 121
>UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S11P -
Cenarchaeum symbiosum
Length = 198
Score = 57.2 bits (132), Expect = 2e-07
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = -2
Query: 443 GEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCKTL 264
G AHI++S+N+T++H+T+L ET++ +GG+ V R ++SP+A M A V E +
Sbjct: 76 GIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKAANKVIESARAK 135
Query: 263 GIT 255
G T
Sbjct: 136 GFT 138
Score = 32.7 bits (71), Expect = 4.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 198 PGAQXXXXXXXXXSMKIXRIEDVTPVPSDST 106
PGAQ +I RI+DVTP+P D+T
Sbjct: 157 PGAQAAIRALARGGFRIGRIDDVTPIPHDTT 187
>UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultured
euryarchaeote ARMAN-2|Rep: 30S ribosomal protein S11 -
uncultured euryarchaeote ARMAN-2
Length = 169
Score = 54.8 bits (126), Expect = 9e-07
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = -2
Query: 437 AHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCKTLGI 258
AH+++S NDT++ +T+L ETIA +GGM V + SPYA M A V + K GI
Sbjct: 49 AHVYSSKNDTIITLTDLSGSETIAVGSGGMMVNADSQEGSPYAAMQAAYKVAAEAKEKGI 108
Query: 257 T 255
T
Sbjct: 109 T 109
Score = 32.3 bits (70), Expect = 5.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 195 GAQXXXXXXXXXSMKIXRIEDVTPVPSDST 106
GAQ +++ RIEDVTP+P+D+T
Sbjct: 129 GAQAVVRVLARSGLRVNRIEDVTPIPTDTT 158
>UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_246, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 182
Score = 42.7 bits (96), Expect = 0.004
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -2
Query: 377 ETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCKTLGITAL 249
ET+ TGGMK K ++SP A M AQ+V ++CK L IT L
Sbjct: 50 ETLVRTTGGMKEKTDGEESSPCAAMPAAQDVSQECKELDITVL 92
Score = 37.9 bits (84), Expect = 0.11
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 250 LHIKLRATGENKTKTPGPWCSVCTSGSCSFKYED 149
LH+KL A NKTKTPGP CSF E+
Sbjct: 92 LHVKLHAARGNKTKTPGPGAQSALQAPCSFWNEN 125
>UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 104
Score = 38.3 bits (85), Expect = 0.080
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = -2
Query: 398 VTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCKTLGITAL 249
V L ET+ TGGMK K ++SP A M AQ+V ++ K L IT L
Sbjct: 22 VQPLDLLETLVRSTGGMKEKADGEESSPCAAMPAAQDVSQRFKELDITVL 71
>UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3;
Homo/Pan/Gorilla group|Rep: Similar to ribosomal protein
S14 - Homo sapiens (Human)
Length = 350
Score = 37.5 bits (83), Expect = 0.14
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -2
Query: 350 MKVKPARNKASPYAVMLPAQNVPEKCKTLGITAL 249
MK + ++++SP ML AQ+V ++CK LGITAL
Sbjct: 1 MKEQADQDESSPCTAMLTAQDVVQRCKELGITAL 34
Score = 36.3 bits (80), Expect = 0.32
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 280 KNAKLLA*RPLHIKLRATGENKTKTPGP 197
+ K L LHIKL ATG N+TKTPGP
Sbjct: 24 QRCKELGITALHIKLLATGGNRTKTPGP 51
>UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular
organisms|Rep: 30S ribosomal protein S11 - Shewanella
oneidensis
Length = 130
Score = 37.5 bits (83), Expect = 0.14
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = -2
Query: 443 GEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCKTL 264
G AHI ASFN+T+V +T+ +GG + +R K++P+A + A+ +
Sbjct: 20 GMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR-KSTPFAAQVAAERAGAAAQDY 78
Query: 263 GITAL 249
G+ L
Sbjct: 79 GLKNL 83
>UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15;
Bacteria|Rep: 30S ribosomal protein S11 - Silicibacter
pomeroyi
Length = 130
Score = 36.7 bits (81), Expect = 0.24
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -2
Query: 443 GEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCKTL 264
G AH+ ++FN+T + ++++ G M K +R K++PYA L A++ K +
Sbjct: 20 GVAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQLAAEDAGRKAQDH 78
Query: 263 GITAL 249
G+ L
Sbjct: 79 GVKTL 83
>UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48;
Bacteria|Rep: 30S ribosomal protein S11 - Streptococcus
mutans
Length = 127
Score = 35.9 bits (79), Expect = 0.43
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = -2
Query: 443 GEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCKTL 264
G AHI A+FN+T+V +T++ G + K +R K++P+A + A+ + +
Sbjct: 17 GIAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSR-KSTPFAAQMAAEAAAKSAQEH 75
Query: 263 GI 258
G+
Sbjct: 76 GL 77
>UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular
organisms|Rep: Ribosomal protein S11 - Chlorokybus
atmophyticus (Soil alga)
Length = 262
Score = 35.1 bits (77), Expect = 0.75
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -2
Query: 443 GEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCKTL 264
G AHI + N+T++ +T+L +G + K +R K S YA A+ +K L
Sbjct: 152 GVAHIQTTLNNTIITITDLDGNTKSWSSSGSIGFKGSRRKTS-YAAQAAAETAAKKSIQL 210
Query: 263 GI 258
GI
Sbjct: 211 GI 212
>UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 332
Score = 34.7 bits (76), Expect = 0.99
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -2
Query: 362 VTGGMKVKPARNKASPYAVMLPAQNVPEKCK 270
V GGMK+K +++SPYA ML +Q+V CK
Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQDVALCCK 241
>UniRef50_Q8ZU26 Cluster: Sua5 family protein; n=7;
Thermoprotei|Rep: Sua5 family protein - Pyrobaculum
aerophilum
Length = 343
Score = 34.3 bits (75), Expect = 1.3
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = -2
Query: 416 NDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCKTLGITALAHKA 237
N +VHV ++ IA + G++ A+ P +++ ++ V +C T G+ +A +A
Sbjct: 62 NPLIVHVDSVEMASEIAEIPEGIRGVLAQLWPGPVTIVVKSRGVVPRCVTAGLNTVAVRA 121
Query: 236 PCY 228
P +
Sbjct: 122 PAH 124
>UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular
organisms|Rep: 30S ribosomal protein S11 - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 134
Score = 34.3 bits (75), Expect = 1.3
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = -2
Query: 443 GEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQ 291
G AH+ ASFN+T++ +T+ +GG K +R K++P+A + ++
Sbjct: 24 GIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR-KSTPFAAQVASE 73
>UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus
oeni ATCC BAA-1163|Rep: Ribosomal protein S11 -
Oenococcus oeni ATCC BAA-1163
Length = 113
Score = 33.9 bits (74), Expect = 1.7
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = -2
Query: 443 GEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKC--K 270
G AHI ++FN+T+V +T+ G + K +R K++P+A L + + +
Sbjct: 22 GVAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSR-KSTPFAAQLAGEAAAKAAMEQ 80
Query: 269 TLGITALAHKAPCYW 225
+ A++ K P W
Sbjct: 81 NMHSVAISVKGPGIW 95
>UniRef50_Q1YJV9 Cluster: Putative ATPase, PP-loop superfamily
implicated in cell cycle control; n=1; Aurantimonas sp.
SI85-9A1|Rep: Putative ATPase, PP-loop superfamily
implicated in cell cycle control - Aurantimonas sp.
SI85-9A1
Length = 410
Score = 32.7 bits (71), Expect = 4.0
Identities = 26/83 (31%), Positives = 37/83 (44%)
Frame = -2
Query: 446 FGEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCKT 267
FG I + ++ T+L ARE AGV G ++P R+ AS + P +V
Sbjct: 92 FGATVILTAHHEDDQCETHLMARERGAGVVGLAGMRPVRSLASDLVLARPFLDVAG--DR 149
Query: 266 LGITALAHKAPCYW*KQNKDPWS 198
L + AH+ P N DP S
Sbjct: 150 LKASVAAHRLPAVADPTNDDPAS 172
>UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular
organisms|Rep: 30S ribosomal protein S11 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 31.9 bits (69), Expect = 7.0
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -2
Query: 443 GEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPEKCKTL 264
G AHI ASFN+T+V +++ P+ ++ + G K +P+A A +
Sbjct: 32 GLAHIQASFNNTIVTISD-PSGNVVSWKSSGSLGFRGSRKGTPFAAQQAAMTAANMARDH 90
Query: 263 GITAL 249
G+ +L
Sbjct: 91 GMRSL 95
>UniRef50_Q18FW5 Cluster: Putative uncharacterized protein; n=1;
Haloquadratum walsbyi DSM 16790|Rep: Putative
uncharacterized protein - Haloquadratum walsbyi (strain
DSM 16790)
Length = 554
Score = 31.5 bits (68), Expect = 9.2
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 69 ITACVLFGHPSYGSSLMVRG*HLQCGQSSYLNEQEPEVQTEHQGPGVFVLFSP--VARSF 242
IT +L +PS ++L+ R L +S++ Q QT+H GP F SP VA SF
Sbjct: 107 ITPSMLLRNPSVAATLLERAETLW--ESTFGTHQPARTQTDHPGPFPFQEISPAAVANSF 164
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,518,215
Number of Sequences: 1657284
Number of extensions: 9675529
Number of successful extensions: 19201
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 18691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19198
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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