Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2425
         (462 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    24   0.60 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   5.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.4  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 24.2 bits (50), Expect = 0.60
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 283 GTFCAGNITA*GDALLRAGFTFMPPV 360
           G FC G   A G A+  A + FMP +
Sbjct: 193 GIFCPGGSIANGYAISCARYRFMPDI 218


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 412 SLNEAKMCASPNTGSPT 462
           ++NE + C++P   SPT
Sbjct: 427 NVNENQDCSTPTENSPT 443


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 419 MKRKCVLHQTLVR 457
           +KR  +LH+TLVR
Sbjct: 78  IKRMVLLHKTLVR 90


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,629
Number of Sequences: 336
Number of extensions: 2403
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)