Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2421
         (665 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0609 - 16161801-16162848,16163525-16163682,16163806-161638...    29   3.3  
02_04_0001 - 18816492-18816741,18816881-18817050,18817244-188173...    29   4.4  

>05_03_0609 -
           16161801-16162848,16163525-16163682,16163806-16163835,
           16164242-16164323,16164599-16164672
          Length = 463

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -1

Query: 311 SLRRDSTWFLNVEIQNILTGGRTSCES 231
           S  R ST   + ++Q++LTGG ++CES
Sbjct: 263 SKSRTSTQGASADVQDVLTGGLSACES 289


>02_04_0001 -
           18816492-18816741,18816881-18817050,18817244-18817388,
           18817495-18817565,18817910-18817993,18818103-18818222,
           18818310-18818480,18818955-18819044,18821893-18821985,
           18822073-18822405
          Length = 508

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 514 TNERAQNTFQLRFYSIIFIWNSSFAAIFISQCF 416
           T++  +NT  LR +S+I I +S   +  IS CF
Sbjct: 335 TDDSERNTLSLRSFSLILIHDSDMHSCCISFCF 367


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,905,921
Number of Sequences: 37544
Number of extensions: 336256
Number of successful extensions: 697
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)