Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2421
         (665 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35663-6|CAD82917.1|  606|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical pr...    28   5.2  

>Z35663-6|CAD82917.1|  606|Caenorhabditis elegans Hypothetical
           protein T04A8.7b protein.
          Length = 606

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 478 NEVGKYFGHVHWSQLPRVRSEATFN*FSKSLSLI 579
           N +G  FGH  W   PRV +  +F+   +  +L+
Sbjct: 443 NFIGNEFGHPEWLDFPRVGNGESFHYARRQFNLV 476


>Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical
           protein T04A8.7a protein.
          Length = 681

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 478 NEVGKYFGHVHWSQLPRVRSEATFN*FSKSLSLI 579
           N +G  FGH  W   PRV +  +F+   +  +L+
Sbjct: 518 NFIGNEFGHPEWLDFPRVGNGESFHYARRQFNLV 551


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,352,207
Number of Sequences: 27780
Number of extensions: 289209
Number of successful extensions: 567
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)