Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2420
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.6  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              22   4.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   4.5  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   6.0  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 436 LFGKLLEGIEVCQLYIHSVFLC 501
           L GK + GI +C+L++    LC
Sbjct: 98  LLGKWIFGIHLCKLWLTCDVLC 119


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 436 LFGKLLEGIEVCQLYIHSVFLC 501
           L GK + GI +C+L++    LC
Sbjct: 98  LLGKWIFGIHLCKLWLTCDVLC 119


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 436 LFGKLLEGIEVCQLYIHSVFLC 501
           L GK + GI +C+L++    LC
Sbjct: 98  LLGKWIFGIHLCKLWLTCDVLC 119


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 88  CFFKCILIIFNVI 126
           C+F C+L  FNV+
Sbjct: 70  CYFNCVLEKFNVM 82


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 266 ERSCENKATGPFYNEDGFQAVG 201
           E+  E+   GP YN D F  +G
Sbjct: 195 EKRKEHHLEGPSYNSDIFAMIG 216


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 173 FNQSRRMCVNLRLESRLHYRK 235
           +N S RM  NLR E++ +YR+
Sbjct: 378 YNASSRMENNLRGETQSNYRE 398


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,805
Number of Sequences: 438
Number of extensions: 3423
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)