Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2418
         (623 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   2.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   7.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.8  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 511 SSGRSRNCTGIPDSRRIGFNSW 446
           S  +++NC+GI    RI  + W
Sbjct: 112 SWAKNQNCSGITSVYRIAIDEW 133


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = +3

Query: 45  RRANCPSYRKRPPGKQLDTNPLPSPNNTQSE 137
           R    P+Y   PP      NP P P   Q E
Sbjct: 203 RARETPNYTACPPTLACPLNPNPQPLTGQQE 233


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 272 DEPLPPYGVVRG 237
           DEPLPP   +RG
Sbjct: 372 DEPLPPPPPIRG 383


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 7   TAVYATLATGTSTGEPTAPRIVSDPPGSSSIRTP 108
           TAV       T++     PRI S P  S+S   P
Sbjct: 497 TAVIHEPVVETNSSPSPNPRIASAPSSSTSSSPP 530


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,659
Number of Sequences: 438
Number of extensions: 3172
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)