Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2416
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358805-1|AAQ89165.1|  544|Homo sapiens brush border protein.         31   4.7  

>AY358805-1|AAQ89165.1|  544|Homo sapiens brush border protein.
          Length = 544

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 23/72 (31%), Positives = 33/72 (45%)
 Frame = -1

Query: 344 ICFILFIWCFFRFKCIITVVY*LFNICVSAQMW*NKTKPLDATSRDPPKSPLKKSQ*MTT 165
           + FIL  W  F      T V+   N+ +S   W N TK L       PK+PL   + +T 
Sbjct: 14  LLFILASWIIFTVFQNSTKVWSALNLSISLHYWNNSTKSLF------PKTPLISLKPLTE 67

Query: 164 ILLRLYFILKHL 129
             LR+  I++ L
Sbjct: 68  TELRIKEIIEKL 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,639,562
Number of Sequences: 237096
Number of extensions: 1835729
Number of successful extensions: 3244
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3244
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)