Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2404
         (705 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.92 
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      24   1.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   6.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   8.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 364 GFVQASTASLVLQDSPSPSSQLESMNF 284
           G +    +SLV+Q+ P+P+++ E   F
Sbjct: 480 GGITRDISSLVVQEQPTPTTESEERRF 506


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 3   GRSVARHRVTMNSFEDNLLELIRSHP 80
           GRS+  HRV +++      EL++S P
Sbjct: 40  GRSLKAHRVVLSACSPYFRELLKSTP 65


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/50 (20%), Positives = 23/50 (46%)
 Frame = +3

Query: 507 KRRDHSLSEELSTYKEENEVILSRIRDKGNSPVPRSFSSMADVGLPNAPR 656
           K  +H     +S     N+ IL    ++GN+ +  ++ +   + +  +PR
Sbjct: 447 KINNHEYKRSVSRESNSNQFILMTTVNEGNNNMAATYMNECLLNIQKSPR 496


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +3

Query: 504 EKRRDHSLSEELSTYKEENEVILSR 578
           EKR+    ++ L+T K+ NE++ ++
Sbjct: 400 EKRQSVPANDLLTTEKDNNEIVTAQ 424


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 705 VTNFGRFSNRNFGLFSPGGHLANPH 631
           + +F +F+NR  G+F     L +PH
Sbjct: 96  IRDFSKFANRGLGVFERTEPL-SPH 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,118
Number of Sequences: 438
Number of extensions: 4116
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)