Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2402
(359 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 32 0.10
Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical pr... 31 0.18
Z81057-3|CAB02916.1| 168|Caenorhabditis elegans Hypothetical pr... 29 0.74
AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical... 28 1.7
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical... 28 1.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 2.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 2.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 2.3
Z81548-4|CAB04465.1| 916|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z81503-5|CAB04114.1| 916|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z50874-5|CAA90764.1| 305|Caenorhabditis elegans Hypothetical pr... 27 3.0
U53335-4|AAL27231.1| 504|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 27 5.2
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 27 5.2
AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular... 27 5.2
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 27 5.2
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 27 5.2
Z92822-1|CAB07300.4| 311|Caenorhabditis elegans Hypothetical pr... 26 6.9
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 26 6.9
U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated p... 26 6.9
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 26 6.9
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 26 6.9
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 26 6.9
AY466439-1|AAS45709.1| 311|Caenorhabditis elegans SID-2 protein. 26 6.9
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 26 6.9
AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical ... 26 6.9
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 26 6.9
Z83217-6|CAD59136.1| 128|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr... 26 9.1
AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical ... 26 9.1
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 32.3 bits (70), Expect = 0.10
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 326 PSASTXMAQANPPRQSKKVQPTPAPRGRTSAGAP 225
PS+S+ +++PP K P+ PR TSA AP
Sbjct: 61 PSSSSHHKKSSPPHHQKSAAPSAPPRDVTSAHAP 94
>Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical
protein T15H9.5 protein.
Length = 173
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 112 TETFPVPTVQNSAPQPTDPENMEVTENSTPAHTIPS 5
+ET V VQN+ P+P P M + E+ + +PS
Sbjct: 18 SETSKVQNVQNTQPKPAAPSQMSIDESHSKNQKLPS 53
>Z81057-3|CAB02916.1| 168|Caenorhabditis elegans Hypothetical
protein F10D11.4 protein.
Length = 168
Score = 29.5 bits (63), Expect = 0.74
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 112 TETFPVPTVQNSAPQPTDPENMEVTENSTPAHTIPS 5
+ET V VQ + P+P P M + E+++ +PS
Sbjct: 21 SETSKVQNVQETPPKPAAPSQMSIDESNSKNKKLPS 56
>AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical
protein W02D3.10b protein.
Length = 946
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 133 ERNGRMQTETFPVPTVQNSAPQPTDPENMEV 41
+R GRM T + T+ + P PTD EN+ +
Sbjct: 73 DRGGRMFEFTHSIFTLLSILPNPTDAENLSI 103
>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
protein W02D3.10a protein.
Length = 1437
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 133 ERNGRMQTETFPVPTVQNSAPQPTDPENMEV 41
+R GRM T + T+ + P PTD EN+ +
Sbjct: 73 DRGGRMFEFTHSIFTLLSILPNPTDAENLSI 103
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -1
Query: 293 PPRQSKKVQPTPAPRGRTSAGAPTISRPTSG 201
PPRQ ++ P G G+P RP G
Sbjct: 332 PPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 362
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -1
Query: 293 PPRQSKKVQPTPAPRGRTSAGAPTISRPTSG 201
PPRQ ++ P G G+P RP G
Sbjct: 353 PPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 383
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -1
Query: 293 PPRQSKKVQPTPAPRGRTSAGAPTISRPTSG 201
PPRQ ++ P G G+P RP G
Sbjct: 338 PPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 368
>Z81548-4|CAB04465.1| 916|Caenorhabditis elegans Hypothetical
protein F14F7.5 protein.
Length = 916
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 317 STXMAQANPPRQSKKVQPTPAPRGRTSAGAPTISRPTSGITTL 189
+T ++ P QS QP P PRG + S P + +L
Sbjct: 783 ATPLSSPAPSNQSPPSQPQPGPRGSSPPAPSAPSAPETDTNSL 825
>Z81503-5|CAB04114.1| 916|Caenorhabditis elegans Hypothetical
protein F14F7.5 protein.
Length = 916
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 317 STXMAQANPPRQSKKVQPTPAPRGRTSAGAPTISRPTSGITTL 189
+T ++ P QS QP P PRG + S P + +L
Sbjct: 783 ATPLSSPAPSNQSPPSQPQPGPRGSSPPAPSAPSAPETDTNSL 825
>Z50874-5|CAA90764.1| 305|Caenorhabditis elegans Hypothetical
protein R10E4.3 protein.
Length = 305
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 93 LQCRILHHNQPTQRTWRSQKTPLR 22
L RI+HHNQP+++T + + +R
Sbjct: 203 LLSRIVHHNQPSRKTLKPATSTIR 226
>U53335-4|AAL27231.1| 504|Caenorhabditis elegans Hypothetical
protein C55C3.3 protein.
Length = 504
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 326 PSASTXMAQANPPRQSKKVQPTPAPRGRTSAGAPTISRPTSGITT 192
P + + +A +P + P AP T A PTI PT+ I T
Sbjct: 330 PLSISRVAFGSPIAPKPRPSPLQAPLLETLATPPTIDAPTAAIET 374
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -1
Query: 332 ALPSASTXMAQANPPRQSKKVQPTPAPRGRTSAGAPTISRPTSGITTL 189
++PS + P + +PAP T+ TI+ PT+ TT+
Sbjct: 11 SIPSRDPVITTTIRPNSTTTTTTSPAPNITTTTTTTTIAPPTNTTTTI 58
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = -2
Query: 127 NGRMQTETFPVPTVQNSAPQPTDPENMEVTENSTPAHT 14
+ + P TVQ S PT P T +TP T
Sbjct: 328 SAHLDNSDVPTTTVQTSTTVPTTPSKTTATTTTTPKPT 365
>Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical
protein C17G1.6b protein.
Length = 685
Score = 26.6 bits (56), Expect = 5.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -1
Query: 341 VVEALPSASTXMAQANPPRQSKKVQPTP 258
++ LP A + ++++N PR ++ P P
Sbjct: 93 IILTLPQAESLLSESNSPRSRRQAHPDP 120
>Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical
protein C17G1.6a protein.
Length = 765
Score = 26.6 bits (56), Expect = 5.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -1
Query: 341 VVEALPSASTXMAQANPPRQSKKVQPTP 258
++ LP A + ++++N PR ++ P P
Sbjct: 93 IILTLPQAESLLSESNSPRSRRQAHPDP 120
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 100 PVPTVQNSAPQPTDPENMEVTENSTPAHT 14
P TVQ S PT P T +TP T
Sbjct: 496 PTTTVQTSTTVPTTPSKTTATTTTTPKPT 524
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 100 PVPTVQNSAPQPTDPENMEVTENSTPAHT 14
P TVQ S PT P T +TP T
Sbjct: 377 PTTTVQTSTTVPTTPSKTTATTTTTPKPT 405
>AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular
matrix metalloproteaseprotein.
Length = 685
Score = 26.6 bits (56), Expect = 5.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -1
Query: 341 VVEALPSASTXMAQANPPRQSKKVQPTP 258
++ LP A + ++++N PR ++ P P
Sbjct: 93 IILTLPQAESLLSESNSPRSRRQAHPDP 120
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 100 PVPTVQNSAPQPTDPENMEVTENSTPA 20
P P VQ SA + PE M+ +E +T A
Sbjct: 564 PTPQVQISAQEAAIPEKMDTSEAATAA 590
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 100 PVPTVQNSAPQPTDPENMEVTENSTPA 20
P P VQ SA + PE M+ +E +T A
Sbjct: 564 PTPQVQISAQEAAIPEKMDTSEAATAA 590
>Z92822-1|CAB07300.4| 311|Caenorhabditis elegans Hypothetical
protein ZK520.2 protein.
Length = 311
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 130 RNGRMQTETFPVPTVQNSAPQPTDPEN 50
RN M T+ VPT +SA QP+ N
Sbjct: 272 RNTVMTTQELVVPTANSSAAQPSTTSN 298
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 127 NGRMQTETFPVPTVQNSAPQPTDPENMEVTENSTPAHTIPS 5
NG + P S+ +PT + + +STP HT+PS
Sbjct: 1700 NGHTTESSTSAPIGVLSSGEPTSSNS--IPSSSTPTHTVPS 1738
>U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated
protein 73, isoform d protein.
Length = 552
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 127 NGRMQTETFPVPTVQNSAPQPTDPENMEVTENSTPAHTIPS 5
NG + P S+ +PT + + +STP HT+PS
Sbjct: 54 NGHTTESSTSAPIGVLSSGEPTSSNS--IPSSSTPTHTVPS 92
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 127 NGRMQTETFPVPTVQNSAPQPTDPENMEVTENSTPAHTIPS 5
NG + P S+ +PT + + +STP HT+PS
Sbjct: 135 NGHTTESSTSAPIGVLSSGEPTSSNS--IPSSSTPTHTVPS 173
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 127 NGRMQTETFPVPTVQNSAPQPTDPENMEVTENSTPAHTIPS 5
NG + P S+ +PT + + +STP HT+PS
Sbjct: 140 NGHTTESSTSAPIGVLSSGEPTSSNS--IPSSSTPTHTVPS 178
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 127 NGRMQTETFPVPTVQNSAPQPTDPENMEVTENSTPAHTIPS 5
NG + P S+ +PT + + +STP HT+PS
Sbjct: 1700 NGHTTESSTSAPIGVLSSGEPTSSNS--IPSSSTPTHTVPS 1738
>AY466439-1|AAS45709.1| 311|Caenorhabditis elegans SID-2 protein.
Length = 311
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 130 RNGRMQTETFPVPTVQNSAPQPTDPEN 50
RN M T+ VPT +SA QP+ N
Sbjct: 272 RNTVMTTQELVVPTANSSAAQPSTTSN 298
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = -1
Query: 287 RQSKKVQPTPAPRGRTSAGAPTISRPT 207
++ ++ Q TPAP G +++GA T S+P+
Sbjct: 612 KKFRQTQKTPAPSGASTSGAST-SKPS 637
>AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical
protein F47G6.3 protein.
Length = 346
Score = 26.2 bits (55), Expect = 6.9
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 338 VEALP-SASTXMAQANPPRQSKKVQPTPAPRGRTSAGAPTISRPTSG 201
V+ LP +A + M+ A P + K TPA +TS PT S+ ++G
Sbjct: 65 VDELPKTAGSVMSPAPNPPKFKPPPSTPAKTNQTSTPVPT-SKDSTG 110
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 127 NGRMQTETFPVPTVQNSAPQPTDPENMEVTENSTPAHTIPS 5
NG + P S+ +PT + + +STP HT+PS
Sbjct: 1700 NGHTTESSTSAPIGVLSSGEPTSSNS--IPSSSTPTHTVPS 1738
>Z83217-6|CAD59136.1| 128|Caenorhabditis elegans Hypothetical
protein C10C6.7a protein.
Length = 128
Score = 25.8 bits (54), Expect = 9.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 291 ATAVKESPTYSCSPWSHFCWCSH 223
+T+ S ++C+ S CWCSH
Sbjct: 102 STSDNFSNYFNCNSNSSLCWCSH 124
>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
protein C44B9.4 protein.
Length = 1150
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -1
Query: 290 PRQSKKVQPTPAPRGR-TSAGAPTISRPTSG 201
P+Q +K P P RGR G P SR + G
Sbjct: 858 PKQQRKRNPQPVGRGRGRGGGRPRGSRSSRG 888
>AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical
protein H25P19.1 protein.
Length = 349
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 299 ANPPRQSKKVQPTPAPRGRTSAGAPTISRPT 207
+ PPR + K + TP+ G + G IS PT
Sbjct: 269 SRPPRINLKFRFTPSKLGTATPGISIISSPT 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,369,881
Number of Sequences: 27780
Number of extensions: 122747
Number of successful extensions: 859
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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