Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2401
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 181 1e-45
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 181 1e-45
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 181 1e-45
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 181 1e-45
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 181 1e-45
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 178 9e-45
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 145 1e-34
BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein. 44 3e-04
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 44 3e-04
AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associa... 44 3e-04
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 44 3e-04
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 43 8e-04
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 43 8e-04
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 43 8e-04
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 43 8e-04
L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interact... 42 0.001
D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p4... 42 0.001
BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome, ma... 42 0.001
BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome, ma... 42 0.001
AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens ... 42 0.001
AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase s... 42 0.001
L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulat... 38 0.018
CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein. 38 0.018
BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome, ma... 38 0.018
BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome, ma... 38 0.018
BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome, ma... 38 0.018
BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome, ma... 38 0.018
BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome, ma... 38 0.018
AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase s... 38 0.018
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 38 0.031
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 38 0.031
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 38 0.031
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 38 0.031
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 38 0.031
U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein. 36 0.071
BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome, ma... 36 0.071
BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome, ma... 36 0.071
BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome, ma... 36 0.071
BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome, ma... 36 0.071
AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo sa... 36 0.071
M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human immunodef... 35 0.16
CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein. 35 0.16
BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein. 35 0.16
BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome, ma... 35 0.16
BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome, ma... 35 0.16
BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome, ma... 35 0.16
AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase s... 35 0.16
AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein. 35 0.16
BC113656-1|AAI13657.1| 1390|Homo sapiens ATPase family, AAA doma... 33 0.87
BC007123-1|AAH07123.1| 939|Homo sapiens ATAD2 protein protein. 33 0.87
AY598335-1|AAT06746.1| 1390|Homo sapiens L16 protein. 33 0.87
AK097133-1|BAC04959.1| 978|Homo sapiens protein ( Homo sapiens ... 33 0.87
U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein. 31 2.0
D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly facto... 31 2.0
BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis ... 31 2.0
AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis ... 31 2.0
AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly fac... 31 2.0
AB208906-1|BAD92143.1| 836|Homo sapiens peroxisomal biogenesis ... 31 2.0
AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein. 31 2.0
AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein. 31 2.0
U37012-1|AAC50293.1| 1442|Homo sapiens cleavage and polyadenylat... 30 4.6
BC017232-1|AAH17232.1| 1443|Homo sapiens cleavage and polyadenyl... 30 4.6
AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens ... 30 4.6
BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associa... 29 8.1
AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens ... 29 8.1
AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens ... 29 8.1
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 181 bits (441), Expect = 1e-45
Identities = 86/112 (76%), Positives = 94/112 (83%)
Frame = +3
Query: 93 EAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNA 272
EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN
Sbjct: 141 EAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNE 200
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
VGYDDIGGCRKQLAQIKEMVELPLRH +LFK I + R G PGT K
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKP-PRGILLYGPPGTGK 251
Score = 64.1 bits (149), Expect = 3e-10
Identities = 25/30 (83%), Positives = 30/30 (100%)
Frame = +2
Query: 2 GKRVHILPIDDSVEGLTGNLFEVYLKPYFM 91
GKR+H+LPIDD+VEG+TGNLFEVYLKPYF+
Sbjct: 111 GKRIHVLPIDDTVEGITGNLFEVYLKPYFL 140
Score = 37.1 bits (82), Expect = 0.041
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +1
Query: 364 RVFGVKPSPGISHVWAALVPGKTLIGLXXXXXNKSFSFFLINGPGDHCFKLAGESGVNL 540
+ GVKP GI ++ GKTLI +F FFLINGP + KLAGES NL
Sbjct: 231 KAIGVKPPRGIL-LYGPPGTGKTLIARAVANETGAF-FFLINGP-EIMSKLAGESESNL 286
Score = 32.3 bits (70), Expect = 1.2
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 398 LMYGPPWYPEKHSLACAVANETRAFLFF*LMDPEII 505
L+YGPP K +A AVANET AF FF + PEI+
Sbjct: 242 LLYGPPG-TGKTLIARAVANETGAF-FFLINGPEIM 275
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 181 bits (441), Expect = 1e-45
Identities = 86/112 (76%), Positives = 94/112 (83%)
Frame = +3
Query: 93 EAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNA 272
EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN
Sbjct: 141 EAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNE 200
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
VGYDDIGGCRKQLAQIKEMVELPLRH +LFK I + R G PGT K
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKP-PRGILLYGPPGTGK 251
Score = 64.1 bits (149), Expect = 3e-10
Identities = 25/30 (83%), Positives = 30/30 (100%)
Frame = +2
Query: 2 GKRVHILPIDDSVEGLTGNLFEVYLKPYFM 91
GKR+H+LPIDD+VEG+TGNLFEVYLKPYF+
Sbjct: 111 GKRIHVLPIDDTVEGITGNLFEVYLKPYFL 140
Score = 37.1 bits (82), Expect = 0.041
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +1
Query: 364 RVFGVKPSPGISHVWAALVPGKTLIGLXXXXXNKSFSFFLINGPGDHCFKLAGESGVNL 540
+ GVKP GI ++ GKTLI +F FFLINGP + KLAGES NL
Sbjct: 231 KAIGVKPPRGIL-LYGPPGTGKTLIARAVANETGAF-FFLINGP-EIMSKLAGESESNL 286
Score = 32.3 bits (70), Expect = 1.2
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 398 LMYGPPWYPEKHSLACAVANETRAFLFF*LMDPEII 505
L+YGPP K +A AVANET AF FF + PEI+
Sbjct: 242 LLYGPPG-TGKTLIARAVANETGAF-FFLINGPEIM 275
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 181 bits (441), Expect = 1e-45
Identities = 86/112 (76%), Positives = 94/112 (83%)
Frame = +3
Query: 93 EAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNA 272
EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN
Sbjct: 79 EAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNE 138
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
VGYDDIGGCRKQLAQIKEMVELPLRH +LFK I + R G PGT K
Sbjct: 139 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKP-PRGILLYGPPGTGK 189
Score = 64.1 bits (149), Expect = 3e-10
Identities = 25/30 (83%), Positives = 30/30 (100%)
Frame = +2
Query: 2 GKRVHILPIDDSVEGLTGNLFEVYLKPYFM 91
GKR+H+LPIDD+VEG+TGNLFEVYLKPYF+
Sbjct: 49 GKRIHVLPIDDTVEGITGNLFEVYLKPYFL 78
Score = 37.1 bits (82), Expect = 0.041
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +1
Query: 364 RVFGVKPSPGISHVWAALVPGKTLIGLXXXXXNKSFSFFLINGPGDHCFKLAGESGVNL 540
+ GVKP GI ++ GKTLI +F FFLINGP + KLAGES NL
Sbjct: 169 KAIGVKPPRGIL-LYGPPGTGKTLIARAVANETGAF-FFLINGP-EIMSKLAGESESNL 224
Score = 32.3 bits (70), Expect = 1.2
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 398 LMYGPPWYPEKHSLACAVANETRAFLFF*LMDPEII 505
L+YGPP K +A AVANET AF FF + PEI+
Sbjct: 180 LLYGPPG-TGKTLIARAVANETGAF-FFLINGPEIM 213
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 181 bits (441), Expect = 1e-45
Identities = 86/112 (76%), Positives = 94/112 (83%)
Frame = +3
Query: 93 EAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNA 272
EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN
Sbjct: 141 EAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNE 200
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
VGYDDIGGCRKQLAQIKEMVELPLRH +LFK I + R G PGT K
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKP-PRGILLYGPPGTGK 251
Score = 64.1 bits (149), Expect = 3e-10
Identities = 25/30 (83%), Positives = 30/30 (100%)
Frame = +2
Query: 2 GKRVHILPIDDSVEGLTGNLFEVYLKPYFM 91
GKR+H+LPIDD+VEG+TGNLFEVYLKPYF+
Sbjct: 111 GKRIHVLPIDDTVEGITGNLFEVYLKPYFL 140
Score = 37.1 bits (82), Expect = 0.041
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +1
Query: 364 RVFGVKPSPGISHVWAALVPGKTLIGLXXXXXNKSFSFFLINGPGDHCFKLAGESGVNL 540
+ GVKP GI ++ GKTLI +F FFLINGP + KLAGES NL
Sbjct: 231 KAIGVKPPRGIL-LYGPPGTGKTLIARAVANETGAF-FFLINGP-EIMSKLAGESESNL 286
Score = 32.3 bits (70), Expect = 1.2
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 398 LMYGPPWYPEKHSLACAVANETRAFLFF*LMDPEII 505
L+YGPP K +A AVANET AF FF + PEI+
Sbjct: 242 LLYGPPG-TGKTLIARAVANETGAF-FFLINGPEIM 275
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 181 bits (441), Expect = 1e-45
Identities = 86/112 (76%), Positives = 94/112 (83%)
Frame = +3
Query: 93 EAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNA 272
EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN
Sbjct: 141 EAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNE 200
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
VGYDDIGGCRKQLAQIKEMVELPLRH +LFK I + R G PGT K
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKP-PRGILLYGPPGTGK 251
Score = 64.1 bits (149), Expect = 3e-10
Identities = 25/30 (83%), Positives = 30/30 (100%)
Frame = +2
Query: 2 GKRVHILPIDDSVEGLTGNLFEVYLKPYFM 91
GKR+H+LPIDD+VEG+TGNLFEVYLKPYF+
Sbjct: 111 GKRIHVLPIDDTVEGITGNLFEVYLKPYFL 140
Score = 37.1 bits (82), Expect = 0.041
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +1
Query: 364 RVFGVKPSPGISHVWAALVPGKTLIGLXXXXXNKSFSFFLINGPGDHCFKLAGESGVNL 540
+ GVKP GI ++ GKTLI +F FFLINGP + KLAGES NL
Sbjct: 231 KAIGVKPPRGIL-LYGPPGTGKTLIARAVANETGAF-FFLINGP-EIMSKLAGESESNL 286
Score = 32.3 bits (70), Expect = 1.2
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 398 LMYGPPWYPEKHSLACAVANETRAFLFF*LMDPEII 505
L+YGPP K +A AVANET AF FF + PEI+
Sbjct: 242 LLYGPPG-TGKTLIARAVANETGAF-FFLINGPEIM 275
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 178 bits (434), Expect = 9e-45
Identities = 85/112 (75%), Positives = 93/112 (83%)
Frame = +3
Query: 93 EAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNA 272
EAYRPI + D F+VRGGMRAVEFKVVET PSP+CIVAPDTVIHC+GEPIKRE+EEE+LN
Sbjct: 141 EAYRPIRKGDIFLVRGGMRAVEFKVVETHPSPYCIVAPDTVIHCEGEPIKREDEEESLNE 200
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
VGYDDIGGCRKQLAQIKEMVELPLRH +LFK I + R G PGT K
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKP-PRGILLYGPPGTGK 251
Score = 64.1 bits (149), Expect = 3e-10
Identities = 25/30 (83%), Positives = 30/30 (100%)
Frame = +2
Query: 2 GKRVHILPIDDSVEGLTGNLFEVYLKPYFM 91
GKR+H+LPIDD+VEG+TGNLFEVYLKPYF+
Sbjct: 111 GKRIHVLPIDDTVEGITGNLFEVYLKPYFL 140
Score = 37.1 bits (82), Expect = 0.041
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +1
Query: 364 RVFGVKPSPGISHVWAALVPGKTLIGLXXXXXNKSFSFFLINGPGDHCFKLAGESGVNL 540
+ GVKP GI ++ GKTLI +F FFLINGP + KLAGES NL
Sbjct: 231 KAIGVKPPRGIL-LYGPPGTGKTLIARAVANETGAF-FFLINGP-EIMSKLAGESESNL 286
Score = 32.3 bits (70), Expect = 1.2
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 398 LMYGPPWYPEKHSLACAVANETRAFLFF*LMDPEII 505
L+YGPP K +A AVANET AF FF + PEI+
Sbjct: 242 LLYGPPG-TGKTLIARAVANETGAF-FFLINGPEIM 275
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 145 bits (351), Expect = 1e-34
Identities = 69/90 (76%), Positives = 75/90 (83%)
Frame = +3
Query: 159 FKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEL 338
FKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQIKEMVEL
Sbjct: 1 FKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVEL 60
Query: 339 PLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
PLRH +LFK I + R G PGT K
Sbjct: 61 PLRHPALFKAIGVKP-PRGILLYGPPGTGK 89
Score = 37.1 bits (82), Expect = 0.041
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +1
Query: 364 RVFGVKPSPGISHVWAALVPGKTLIGLXXXXXNKSFSFFLINGPGDHCFKLAGESGVNL 540
+ GVKP GI ++ GKTLI +F FFLINGP + KLAGES NL
Sbjct: 69 KAIGVKPPRGIL-LYGPPGTGKTLIARAVANETGAF-FFLINGP-EIMSKLAGESESNL 124
Score = 32.3 bits (70), Expect = 1.2
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 398 LMYGPPWYPEKHSLACAVANETRAFLFF*LMDPEII 505
L+YGPP K +A AVANET AF FF + PEI+
Sbjct: 80 LLYGPPG-TGKTLIARAVANETGAF-FFLINGPEIM 113
>BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein.
Length = 695
Score = 44.4 bits (100), Expect = 3e-04
Identities = 26/63 (41%), Positives = 33/63 (52%)
Frame = +3
Query: 240 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPG 419
K +E++ V YD IGG QL I+E++ELPL+ LFK A R G PG
Sbjct: 338 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPA-PRGVLLYGPPG 396
Query: 420 TRK 428
T K
Sbjct: 397 TGK 399
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 44.4 bits (100), Expect = 3e-04
Identities = 26/63 (41%), Positives = 33/63 (52%)
Frame = +3
Query: 240 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPG 419
K +E++ V YD IGG QL I+E++ELPL+ LFK A R G PG
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPA-PRGVLLYGPPG 397
Query: 420 TRK 428
T K
Sbjct: 398 TGK 400
>AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associated
factor protein protein.
Length = 790
Score = 44.4 bits (100), Expect = 3e-04
Identities = 26/63 (41%), Positives = 33/63 (52%)
Frame = +3
Query: 240 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPG 419
K +E++ V YD IGG QL I+E++ELPL+ LFK A R G PG
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPA-PRGVLLYGPPG 397
Query: 420 TRK 428
T K
Sbjct: 398 TGK 400
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 44.4 bits (100), Expect = 3e-04
Identities = 26/63 (41%), Positives = 33/63 (52%)
Frame = +3
Query: 240 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPG 419
K +E++ V YD IGG QL I+E++ELPL+ LFK A R G PG
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPA-PRGVLLYGPPG 397
Query: 420 TRK 428
T K
Sbjct: 398 TGK 400
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 42.7 bits (96), Expect = 8e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
V Y D+GGC++Q+ +++E+VE PL H F + E + G PGT K
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEP-PKGVLLFGPPGTGK 222
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 42.7 bits (96), Expect = 8e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
V Y D+GGC++Q+ +++E+VE PL H F + E + G PGT K
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEP-PKGVLLFGPPGTGK 222
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 42.7 bits (96), Expect = 8e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
V Y D+GGC++Q+ +++E+VE PL H F + E + G PGT K
Sbjct: 148 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEP-PKGVLLFGPPGTGK 198
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 42.7 bits (96), Expect = 8e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
V Y D+GGC++Q+ +++E+VE PL H F + E + G PGT K
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEP-PKGVLLFGPPGTGK 222
>L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interactor
protein.
Length = 406
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 279 YDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
Y+ IGG KQ+ +IKE++ELP++H LF+ + A + G PGT K
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEAL-GIAQPKGVLLYGPPGTGK 196
>D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p45
protein.
Length = 406
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 279 YDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
Y+ IGG KQ+ +IKE++ELP++H LF+ + A + G PGT K
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEAL-GIAQPKGVLLYGPPGTGK 196
>BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 279 YDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
Y+ IGG KQ+ +IKE++ELP++H LF+ + A + G PGT K
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEAL-GIAQPKGVLLYGPPGTGK 196
>BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 279 YDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
Y+ IGG KQ+ +IKE++ELP++H LF+ + A + G PGT K
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEAL-GIAQPKGVLLYGPPGTGK 196
>AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens
clone 23598 mRNA, complete cds. ).
Length = 280
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 279 YDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
Y+ IGG KQ+ +IKE++ELP++H LF+ + A + G PGT K
Sbjct: 22 YEMIGGLDKQIKEIKEVIELPVKHPELFEAL-GIAQPKGVLLYGPPGTGK 70
>AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase
subunit 5 variant protein.
Length = 345
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 279 YDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
Y+ IGG KQ+ +IKE++ELP++H LF+ + A + G PGT K
Sbjct: 144 YEMIGGLDKQIKEIKEVIELPVKHPELFEAL-GIAQPKGVLLYGPPGTGK 192
>L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulatory
subunit protein.
Length = 440
Score = 38.3 bits (85), Expect = 0.018
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3
Query: 213 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTR 392
V+ D +P+ + E Y DIGG Q+ +IKE VELPL H ++ + + +
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP-PK 220
Query: 393 HFSCMGRPGTRK 428
G PGT K
Sbjct: 221 GVILYGPPGTGK 232
>CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein.
Length = 440
Score = 38.3 bits (85), Expect = 0.018
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3
Query: 213 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTR 392
V+ D +P+ + E Y DIGG Q+ +IKE VELPL H ++ + + +
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP-PK 220
Query: 393 HFSCMGRPGTRK 428
G PGT K
Sbjct: 221 GVILYGPPGTGK 232
>BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 38.3 bits (85), Expect = 0.018
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3
Query: 213 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTR 392
V+ D +P+ + E Y DIGG Q+ +IKE VELPL H ++ + + +
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP-PK 220
Query: 393 HFSCMGRPGTRK 428
G PGT K
Sbjct: 221 GVILYGPPGTGK 232
>BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 38.3 bits (85), Expect = 0.018
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3
Query: 213 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTR 392
V+ D +P+ + E Y DIGG Q+ +IKE VELPL H ++ + + +
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP-PK 220
Query: 393 HFSCMGRPGTRK 428
G PGT K
Sbjct: 221 GVILYGPPGTGK 232
>BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 38.3 bits (85), Expect = 0.018
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3
Query: 213 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTR 392
V+ D +P+ + E Y DIGG Q+ +IKE VELPL H ++ + + +
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP-PK 220
Query: 393 HFSCMGRPGTRK 428
G PGT K
Sbjct: 221 GVILYGPPGTGK 232
>BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 38.3 bits (85), Expect = 0.018
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3
Query: 213 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTR 392
V+ D +P+ + E Y DIGG Q+ +IKE VELPL H ++ + + +
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP-PK 220
Query: 393 HFSCMGRPGTRK 428
G PGT K
Sbjct: 221 GVILYGPPGTGK 232
>BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 38.3 bits (85), Expect = 0.018
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3
Query: 213 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTR 392
V+ D +P+ + E Y DIGG Q+ +IKE VELPL H ++ + + +
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP-PK 220
Query: 393 HFSCMGRPGTRK 428
G PGT K
Sbjct: 221 GVILYGPPGTGK 232
>AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase
subunit 1 variant protein.
Length = 440
Score = 38.3 bits (85), Expect = 0.018
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3
Query: 213 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTR 392
V+ D +P+ + E Y DIGG Q+ +IKE VELPL H ++ + + +
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP-PK 220
Query: 393 HFSCMGRPGTRK 428
G PGT K
Sbjct: 221 GVILYGPPGTGK 232
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 37.5 bits (83), Expect = 0.031
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 231 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGI 371
+P+ E V Y +IGG +Q+ +++E++ELPL + LF+ +
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 162
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 37.5 bits (83), Expect = 0.031
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 231 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGI 371
+P+ E V Y +IGG +Q+ +++E++ELPL + LF+ +
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 162
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 37.5 bits (83), Expect = 0.031
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 231 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGI 371
+P+ E V Y +IGG +Q+ +++E++ELPL + LF+ +
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 162
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 37.5 bits (83), Expect = 0.031
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 231 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGI 371
+P+ E V Y +IGG +Q+ +++E++ELPL + LF+ +
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 162
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 37.5 bits (83), Expect = 0.031
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 231 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGI 371
+P+ E V Y +IGG +Q+ +++E++ELPL + LF+ +
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 162
>U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.071
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +3
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
V Y DIGG Q +++E VELPL H L+K I + R G PG K
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP-PRGVLMYGPPGCGK 212
>BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.071
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +3
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
V Y DIGG Q +++E VELPL H L+K I + R G PG K
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP-PRGVLMYGPPGCGK 212
>BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.071
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +3
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
V Y DIGG Q +++E VELPL H L+K I + R G PG K
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP-PRGVLMYGPPGCGK 212
>BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 387
Score = 36.3 bits (80), Expect = 0.071
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +3
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
V Y DIGG Q +++E VELPL H L+K I + R G PG K
Sbjct: 131 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP-PRGVLMYGPPGCGK 181
>BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.071
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +3
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
V Y DIGG Q +++E VELPL H L+K I + R G PG K
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP-PRGVLMYGPPGCGK 212
>AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo
sapiens] protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.071
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +3
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
V Y DIGG Q +++E VELPL H L+K I + R G PG K
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP-PRGVLMYGPPGCGK 212
>M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human
immunodeficiency virus tat transactivator binding
protein-1 (tbp-1) mRNA, complete cds. ).
Length = 404
Score = 35.1 bits (77), Expect = 0.16
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 279 YDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
Y DIGG KQ+ ++ E + LP+ H F+ + + + G PGT K
Sbjct: 150 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP-PKGVLMYGPPGTGK 198
>CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein.
Length = 404
Score = 35.1 bits (77), Expect = 0.16
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 279 YDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
Y DIGG KQ+ ++ E + LP+ H F+ + + + G PGT K
Sbjct: 150 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP-PKGVLMYGPPGTGK 198
>BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein.
Length = 491
Score = 35.1 bits (77), Expect = 0.16
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 279 YDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
Y DIGG KQ+ ++ E + LP+ H F+ + + + G PGT K
Sbjct: 237 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP-PKGVLMYGPPGTGK 285
>BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 35.1 bits (77), Expect = 0.16
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 279 YDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
Y DIGG KQ+ ++ E + LP+ H F+ + + + G PGT K
Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP-PKGVLMYGPPGTGK 233
>BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 35.1 bits (77), Expect = 0.16
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 279 YDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
Y DIGG KQ+ ++ E + LP+ H F+ + + + G PGT K
Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP-PKGVLMYGPPGTGK 233
>BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 35.1 bits (77), Expect = 0.16
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 279 YDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
Y DIGG KQ+ ++ E + LP+ H F+ + + + G PGT K
Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP-PKGVLMYGPPGTGK 233
>AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase
subunit 3 variant protein.
Length = 424
Score = 35.1 bits (77), Expect = 0.16
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 279 YDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
Y DIGG KQ+ ++ E + LP+ H F+ + + + G PGT K
Sbjct: 170 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP-PKGVLMYGPPGTGK 218
>AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.16
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = +3
Query: 273 VGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
V Y DIGG Q +++E VELP+ H L+K I + R G PG K
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPVTHFELYKQIGIDP-PRGVLMYGPPGCGK 212
>BC113656-1|AAI13657.1| 1390|Homo sapiens ATPase family, AAA domain
containing 2 protein.
Length = 1390
Score = 32.7 bits (71), Expect = 0.87
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 267 NAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
++V +D +GG +A +KEMV PL + +F+ + R G PGT K
Sbjct: 421 SSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQP-PRGCLFYGPPGTGK 473
>BC007123-1|AAH07123.1| 939|Homo sapiens ATAD2 protein protein.
Length = 939
Score = 32.7 bits (71), Expect = 0.87
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 267 NAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
++V +D +GG +A +KEMV PL + +F+ + R G PGT K
Sbjct: 421 SSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQP-PRGCLFYGPPGTGK 473
>AY598335-1|AAT06746.1| 1390|Homo sapiens L16 protein.
Length = 1390
Score = 32.7 bits (71), Expect = 0.87
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 267 NAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
++V +D +GG +A +KEMV PL + +F+ + R G PGT K
Sbjct: 421 SSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQP-PRGCLFYGPPGTGK 473
>AK097133-1|BAC04959.1| 978|Homo sapiens protein ( Homo sapiens
cDNA FLJ39814 fis, clone SPLEN2009970, weakly similar to
TAT-BINDING HOMOLOG 7. ).
Length = 978
Score = 32.7 bits (71), Expect = 0.87
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 267 NAVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
++V +D +GG +A +KEMV PL + +F+ + R G PGT K
Sbjct: 421 SSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQP-PRGCLFYGPPGTGK 473
>U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein.
Length = 980
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 AVGYDDIGGCRKQLAQIKEMVELPLRHSSLFK-GIWSEAFTRHFSCMGRPGTRK 428
+V + D+GG ++ +I E ++LPL H L G+ H G PGT K
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLLH----GPPGTGK 750
>D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly factor-2
protein.
Length = 980
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 AVGYDDIGGCRKQLAQIKEMVELPLRHSSLFK-GIWSEAFTRHFSCMGRPGTRK 428
+V + D+GG ++ +I E ++LPL H L G+ H G PGT K
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLLH----GPPGTGK 750
>BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 AVGYDDIGGCRKQLAQIKEMVELPLRHSSLFK-GIWSEAFTRHFSCMGRPGTRK 428
+V + D+GG ++ +I E ++LPL H L G+ H G PGT K
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLLH----GPPGTGK 750
>AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 AVGYDDIGGCRKQLAQIKEMVELPLRHSSLFK-GIWSEAFTRHFSCMGRPGTRK 428
+V + D+GG ++ +I E ++LPL H L G+ H G PGT K
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLLH----GPPGTGK 750
>AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly
factor-2 protein.
Length = 980
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 AVGYDDIGGCRKQLAQIKEMVELPLRHSSLFK-GIWSEAFTRHFSCMGRPGTRK 428
+V + D+GG ++ +I E ++LPL H L G+ H G PGT K
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLLH----GPPGTGK 750
>AB208906-1|BAD92143.1| 836|Homo sapiens peroxisomal biogenesis
factor 6 variant protein.
Length = 836
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 AVGYDDIGGCRKQLAQIKEMVELPLRHSSLFK-GIWSEAFTRHFSCMGRPGTRK 428
+V + D+GG ++ +I E ++LPL H L G+ H G PGT K
Sbjct: 718 SVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLLH----GPPGTGK 767
>AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein.
Length = 892
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 AVGYDDIGGCRKQLAQIKEMVELPLRHSSLFK-GIWSEAFTRHFSCMGRPGTRK 428
+V + D+GG ++ +I E ++LPL H L G+ H G PGT K
Sbjct: 613 SVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLLH----GPPGTGK 662
>AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein.
Length = 980
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 AVGYDDIGGCRKQLAQIKEMVELPLRHSSLFK-GIWSEAFTRHFSCMGRPGTRK 428
+V + D+GG ++ +I E ++LPL H L G+ H G PGT K
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLLH----GPPGTGK 750
>U37012-1|AAC50293.1| 1442|Homo sapiens cleavage and polyadenylation
specificity factor protein.
Length = 1442
Score = 30.3 bits (65), Expect = 4.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 350 FFTVQGYLE*SLHPAFLMYGPPWYPEKHSLAC 445
+F QG L S+ PA+L Y PW K L C
Sbjct: 989 YFNRQGELRISVLPAYLSYDAPWPVRKIPLRC 1020
>BC017232-1|AAH17232.1| 1443|Homo sapiens cleavage and polyadenylation
specific factor 1, 160kDa protein.
Length = 1443
Score = 30.3 bits (65), Expect = 4.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 350 FFTVQGYLE*SLHPAFLMYGPPWYPEKHSLAC 445
+F QG L S+ PA+L Y PW K L C
Sbjct: 989 YFNRQGELRISVLPAYLSYDAPWPVRKIPLRC 1020
>AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ37502 fis, clone BRAWH2016446, moderately
similar to TAT-BINDING HOMOLOG 7. ).
Length = 574
Score = 30.3 bits (65), Expect = 4.6
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 270 AVGYDDIGGCRKQLAQIKEMVELPLRHSSLFKGIWSEAFTRHFSCMGRPGTRK 428
+V +D IGG + +KEMV PL + +F+ + R G PGT K
Sbjct: 396 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQP-PRGCLFYGPPGTGK 447
>BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associated
5-like 1 protein.
Length = 753
Score = 29.5 bits (63), Expect = 8.1
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +3
Query: 180 PSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSL 359
P P +V P T + GEP + + + +GG + ++E++ LPLR+
Sbjct: 172 PDPAGLVTPRTRVSLGGEPPSEAQPQPEV------PLGGLSEAADSLRELLRLPLRYPRA 225
Query: 360 FKGIWSEAFTRHFSCMGRPGTRK 428
+ A R G PG K
Sbjct: 226 LTAL-GLAVPRGVLLAGPPGVGK 247
>AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ13170 fis, clone NT2RP3003809, weakly similar to
SAV PROTEIN. ).
Length = 620
Score = 29.5 bits (63), Expect = 8.1
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +3
Query: 180 PSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSL 359
P P +V P T + GEP + + + +GG + ++E++ LPLR+
Sbjct: 172 PDPAGLVTPRTRVSLGGEPPSEAQPQPEV------PLGGLSEAADSLRELLRLPLRYPRA 225
Query: 360 FKGIWSEAFTRHFSCMGRPGTRK 428
+ A R G PG K
Sbjct: 226 LTAL-GLAVPRGVLLAGPPGVGK 247
>AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12286 fis, clone MAMMA1001768, weakly similar to
CELL DIVISION CYCLE PROTEIN 48 HOMOLOG MJ1156. ).
Length = 392
Score = 29.5 bits (63), Expect = 8.1
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +3
Query: 180 PSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHSSL 359
P P +V P T + GEP + + + +GG + ++E++ LPLR+
Sbjct: 172 PDPAGLVTPRTRVSLGGEPPSEAQPQPEV------PLGGLSEAADSLRELLRLPLRYPRA 225
Query: 360 FKGIWSEAFTRHFSCMGRPGTRK 428
+ A R G PG K
Sbjct: 226 LTAL-GLAVPRGVLLAGPPGVGK 247
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,210,292
Number of Sequences: 237096
Number of extensions: 2126368
Number of successful extensions: 3797
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 3665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3794
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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