Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2394
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40419-5|AAA81426.1|  165|Caenorhabditis elegans Hypothetical pr...    31   0.66 
Z71265-5|CAA95836.1|  481|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AL021469-3|CAA16290.2|  435|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z73898-9|CAA98066.2|  913|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>U40419-5|AAA81426.1|  165|Caenorhabditis elegans Hypothetical
           protein C27F2.6 protein.
          Length = 165

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -1

Query: 259 FCFFFITINIKNIHIFYKYKAEIIYLRNILRIEIV 155
           +C FF+  ++ + HIFY ++A + Y  +IL  +I+
Sbjct: 78  YCLFFLISDVLSNHIFYFFQARVRYFFHILARKIL 112


>Z71265-5|CAA95836.1|  481|Caenorhabditis elegans Hypothetical
           protein M05B5.6 protein.
          Length = 481

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
 Frame = -1

Query: 352 WRRAYSAPDGKRRRLKRSISVIHQANYEHLDFCFFFITINIKNIHIFYKYKAEIIYLRNI 173
           W+       GK+  + R   +++  N + +D C FF +++I    +F+   A  ++ RN+
Sbjct: 58  WKELRKLKSGKKWGVIRHPYILNYVNQKLID-CAFFYSLHILAFLVFFLLLAWHVFSRNL 116

Query: 172 LR--IEIVF--YFFAQIKLKGRV 116
            +  +  +F   FF  + LKG +
Sbjct: 117 FKDFLITIFTGIFFMFLVLKGTI 139


>AL021469-3|CAA16290.2|  435|Caenorhabditis elegans Hypothetical
           protein Y116A8B.5 protein.
          Length = 435

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -1

Query: 451 TLYTYRSG*AVPMRVDLLYYEFILNLMTE*HRAWR--RAYSAPDGKRRRLKR 302
           TLYT+  G A P  + +++Y  ++  + +  R  R  R  S PDG   R+K+
Sbjct: 217 TLYTFVIGFAAPAFLIIIFYVQVIYALQKSSRNIRGARGISKPDGSSNRVKK 268


>Z73898-9|CAA98066.2|  913|Caenorhabditis elegans Hypothetical
           protein ZK822.1 protein.
          Length = 913

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = -2

Query: 723 PDGIANTNPSKSRASQNLPPDRKYVQLRRSGEKLIDR 613
           P G++N+N  + R ++ +P +R+ + L  + E+ I R
Sbjct: 659 PSGVSNSNIMRDRVTREVPSNRRPISLVETEERRIRR 695


>U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical
           protein C24A8.1 protein.
          Length = 582

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +1

Query: 100 KENEKIHVLSILFVQKNKIRFLSEVYYE-DR*SLPYIYRIYVY 225
           +E++K+H L    V+K K+R LSE+  + +R S   I  +Y+Y
Sbjct: 354 EESKKLHSLKPPLVEKRKMRRLSEMISDWERPSRSSISNMYLY 396


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,374,384
Number of Sequences: 27780
Number of extensions: 341826
Number of successful extensions: 825
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)