Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2391
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   5.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   5.6  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              21   9.8  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 278 DTVYGHLTRHCKYKFPQGAG 219
           + +YG L  +C+  +P  AG
Sbjct: 360 EKIYGALEGYCRVAWPDDAG 379


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 278 DTVYGHLTRHCKYKFPQGAG 219
           + +YG L  +C+  +P  AG
Sbjct: 360 EKIYGALEGYCRVAWPDDAG 379


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 159 VRNLRAKFLEVFRDM 115
           V+NLRA+ + +F+D+
Sbjct: 17  VQNLRARSVNIFQDI 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,330
Number of Sequences: 438
Number of extensions: 3198
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)