Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2384
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              25   0.90 
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              23   3.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   3.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.8  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   6.4  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              21   8.4  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   8.4  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 177 CSSISDFNIIFVSCKTFSCIS 115
           CS+ISD N+     K F CI+
Sbjct: 104 CSAISDTNVHLKITKIFQCIT 124


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 177 CSSISDFNIIFVSCKTFSCI 118
           CS+ISD ++   S K   CI
Sbjct: 104 CSAISDADLAVKSAKLLKCI 123


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 15/65 (23%), Positives = 29/65 (44%)
 Frame = -2

Query: 437  SVVLNCLLSYNPAACFLTFSLHLLSNQRDISIQKLVYYFHVHNLTGFVQSNNFWPE*REL 258
            S++L+    +N  A    ++LH  +   ++   +L  +   H L G +  N +     +L
Sbjct: 1419 SILLHWKSGHNGGASLTGYTLHYRTAHGNLDELQLSRHATSHELKGLLCGNTY-----QL 1473

Query: 257  YLHDH 243
            YL  H
Sbjct: 1474 YLTSH 1478


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 15/65 (23%), Positives = 29/65 (44%)
 Frame = -2

Query: 437  SVVLNCLLSYNPAACFLTFSLHLLSNQRDISIQKLVYYFHVHNLTGFVQSNNFWPE*REL 258
            S++L+    +N  A    ++LH  +   ++   +L  +   H L G +  N +     +L
Sbjct: 1415 SILLHWKSGHNGGASLTGYTLHYRTAHGNLDELQLSRHATSHELKGLLCGNTY-----QL 1469

Query: 257  YLHDH 243
            YL  H
Sbjct: 1470 YLTSH 1474


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -2

Query: 389 LTFSLHLLSNQRDISIQKLVYYFHVHNLTGFVQSNNFWP 273
           L  SL     +RD+S++ ++Y+     L    + ++ WP
Sbjct: 508 LNKSLKYSDKERDLSLRMILYFSEFAYLGKPTKEDSEWP 546


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 410  NLKDSLKQLNISEIQTDVDKITNQN 484
            +  DS +   ISE + D D++ N+N
Sbjct: 1873 SFNDSKESNEISEAECDRDQLVNRN 1897


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 177 CSSISDFNIIFVSCKTFSC 121
           CS ISD N+     K F C
Sbjct: 104 CSPISDANVHIKISKIFQC 122


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 177 CSSISDFNIIFVSCKTFSCIS 115
           CS+ISD +I   S K   C +
Sbjct: 104 CSAISDADIHLKSSKLIKCFA 124


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 396 LFFDIFIASSFKSKRHF 346
           L +D F  SSF+ + HF
Sbjct: 336 LIYDFFKDSSFRIQHHF 352


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,099
Number of Sequences: 438
Number of extensions: 3759
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)