Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2381
         (720 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033853-1|AAH33853.1|  285|Homo sapiens IRGC protein protein.         33   1.4  
BC111010-1|AAI11011.1|  360|Homo sapiens PER3 protein protein.         31   5.5  
BC066939-1|AAH66939.1|  463|Homo sapiens immunity-related GTPase...    31   5.5  
AC005622-1|AAC34467.1|  463|Homo sapiens R30953_1 protein.             31   5.5  
AB040899-1|BAA95990.1|  505|Homo sapiens KIAA1466 protein protein.     30   7.3  

>BC033853-1|AAH33853.1|  285|Homo sapiens IRGC protein protein.
          Length = 285

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = -1

Query: 654 VLRSQYRYNGLPHPSNRNALLWWYCGGGTYPCGLPRGPTTSDYANYNFAGLIFITRCYSF 475
           V+ +  + +  PHP   +  LW   G G+  C   +     D++ YNF  L+   RC + 
Sbjct: 89  VMETTMQPSPYPHPQFPDVTLWDLPGAGSPGCPADKYLKQVDFSRYNFFLLVSPRRCGAV 148

Query: 474 TVEVNREHLL---STYFIR 427
              +  E L      YF+R
Sbjct: 149 ETRLAAEILCQGKKFYFVR 167


>BC111010-1|AAI11011.1|  360|Homo sapiens PER3 protein protein.
          Length = 360

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -3

Query: 691 GELGTGPPPRDISSKVSVS-LQRATPPFK-PKRITVVVLWWWYLPVRTP 551
           G L TG PPR+  S  + S L   +PP K P   T   L     P RTP
Sbjct: 147 GALSTGSPPRENPSHPTASALSTGSPPMKNPSHPTASTLSMGLPPSRTP 195


>BC066939-1|AAH66939.1|  463|Homo sapiens immunity-related GTPase
           family, cinema protein.
          Length = 463

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = -1

Query: 654 VLRSQYRYNGLPHPSNRNALLWWYCGGGTYPCGLPRGPTTSDYANYNFAGLIFITRCYSF 475
           V+ +  + +  PHP   +  LW   G G+  C   +     D++ Y+F  L+   RC + 
Sbjct: 89  VMETTMQPSPYPHPQFPDVTLWDLPGAGSPGCPADKYLKQVDFSRYDFFLLVSPRRCGAV 148

Query: 474 TVEVNREHLL---STYFIR 427
              +  E L      YF+R
Sbjct: 149 ETRLAAEILCQGKKFYFVR 167


>AC005622-1|AAC34467.1|  463|Homo sapiens R30953_1 protein.
          Length = 463

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = -1

Query: 654 VLRSQYRYNGLPHPSNRNALLWWYCGGGTYPCGLPRGPTTSDYANYNFAGLIFITRCYSF 475
           V+ +  + +  PHP   +  LW   G G+  C   +     D++ Y+F  L+   RC + 
Sbjct: 89  VMETTMQPSPYPHPQFPDVTLWDLPGAGSPGCPADKYLKQVDFSRYDFFLLVSPRRCGAV 148

Query: 474 TVEVNREHLL---STYFIR 427
              +  E L      YF+R
Sbjct: 149 ETRLAAEILCQGKKFYFVR 167


>AB040899-1|BAA95990.1|  505|Homo sapiens KIAA1466 protein protein.
          Length = 505

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 703 DSL*GELGTGPPPRDISSKVSVSLQRATPPFKPKRITV 590
           DS     GTGPP +D+S+K  ++L RA    K + + +
Sbjct: 32  DSKFSSQGTGPPYQDLSTKSRIALNRALLVAKGRTVNI 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,359,242
Number of Sequences: 237096
Number of extensions: 2772414
Number of successful extensions: 5548
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5548
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)