Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2381
         (720 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p...    29   2.5  
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical...    29   2.5  
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z73911-4|CAA98141.2|  625|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF016657-6|AAB93659.1|  309|Caenorhabditis elegans Hypothetical ...    28   5.8  

>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 624  LPHPSNRNALLWWYCGGGTYPCGLPRGPTTSDYANYNFAGLIFITRCYSFTVEVNREHLL 445
            LPH  N + LL W+  GG       R PT    ++   A  + I+ C    +  + ++L 
Sbjct: 1055 LPHTRNDSGLLSWFGLGGGASEADRRKPTQEQLSSMKLASQV-ISECRPSQIVADSKYLT 1113

Query: 444  ST 439
            ST
Sbjct: 1114 ST 1115


>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 624  LPHPSNRNALLWWYCGGGTYPCGLPRGPTTSDYANYNFAGLIFITRCYSFTVEVNREHLL 445
            LPH  N + LL W+  GG       R PT    ++   A  + I+ C    +  + ++L 
Sbjct: 1055 LPHTRNDSGLLSWFGLGGGASEADRRKPTQEQLSSMKLASQV-ISECRPSQIVADSKYLT 1113

Query: 444  ST 439
            ST
Sbjct: 1114 ST 1115


>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
           protein F54F3.1 protein.
          Length = 1584

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/55 (32%), Positives = 21/55 (38%)
 Frame = -1

Query: 618 HPSNRNALLWWYCGGGTYPCGLPRGPTTSDYANYNFAGLIFITRCYSFTVEVNRE 454
           HP+ R     WY G G   CG P        AN    G      C S+  +VN E
Sbjct: 795 HPTGRCKCRGWYVGDGVNHCGPPEENMPKHNANIPQRG---GQACGSYVCDVNAE 846


>Z73911-4|CAA98141.2|  625|Caenorhabditis elegans Hypothetical
           protein T12A7.1 protein.
          Length = 625

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -3

Query: 262 TSQSPLFL-VCGELSTLMKTTANY*LDLAFTGGIVS 158
           T+ SP+ + V  +   +MKTTA Y + L  T GI+S
Sbjct: 434 TNFSPIIVEVANKAQKMMKTTARYQILLIITDGIIS 469


>AF016657-6|AAB93659.1|  309|Caenorhabditis elegans Hypothetical
           protein C16C4.15 protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -1

Query: 435 FIRKIGTRLRDSNTGASLDTNAPDVLSFRP*RLLETTTTSDDDVVIQ 295
           F+   G  L DS      ++N  DV   +P  LLE+    DD +V++
Sbjct: 75  FVSHNGDSLTDSEHFTFENSNKSDVCLMKPWDLLESDYVVDDSIVVE 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,366,174
Number of Sequences: 27780
Number of extensions: 415694
Number of successful extensions: 995
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)