BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2374
(529 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF132172-1|AAD34760.1| 493|Drosophila melanogaster unknown prot... 30 1.7
AE013599-1184|AAF58742.1| 493|Drosophila melanogaster CG7686-PA... 30 1.7
BT029088-1|ABJ17021.1| 455|Drosophila melanogaster IP11344p pro... 29 5.2
AE014298-2688|AAF48813.2| 455|Drosophila melanogaster CG33639-P... 29 5.2
AY069644-1|AAL39789.1| 392|Drosophila melanogaster LD41023p pro... 28 6.8
AF348494-1|AAO15385.1| 390|Drosophila melanogaster DAP3 protein. 28 6.8
AE013599-3396|AAF46846.1| 392|Drosophila melanogaster CG3633-PA... 28 6.8
>AF132172-1|AAD34760.1| 493|Drosophila melanogaster unknown
protein.
Length = 493
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 388 DDTHEAQQENIRSFKDERTEREIAKE 311
D+THE ++E R KD R ER I K+
Sbjct: 438 DETHEEKKERKRLLKDYRNERRIEKK 463
>AE013599-1184|AAF58742.1| 493|Drosophila melanogaster CG7686-PA
protein.
Length = 493
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 388 DDTHEAQQENIRSFKDERTEREIAKE 311
D+THE ++E R KD R ER I K+
Sbjct: 438 DETHEEKKERKRLLKDYRNERRIEKK 463
>BT029088-1|ABJ17021.1| 455|Drosophila melanogaster IP11344p
protein.
Length = 455
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 359 VFLLCLMSVVIFNADSFRGKIYYGLLFSYLKIWVAVSDVFVYGRK 493
VFL CL +V+++ FRG++ +K + SDV+VY R+
Sbjct: 184 VFLTCLATVIVYLPSIFRGEL--------IKCILGSSDVYVYLRR 220
>AE014298-2688|AAF48813.2| 455|Drosophila melanogaster CG33639-PA
protein.
Length = 455
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 359 VFLLCLMSVVIFNADSFRGKIYYGLLFSYLKIWVAVSDVFVYGRK 493
VFL CL +V+++ FRG++ +K + SDV+VY R+
Sbjct: 184 VFLTCLATVIVYLPSIFRGEL--------IKCILGSSDVYVYLRR 220
>AY069644-1|AAL39789.1| 392|Drosophila melanogaster LD41023p
protein.
Length = 392
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -2
Query: 198 TVSMTIHFGSMNDFFYCY--WTRNWSGR 121
T++ +H+G++NDF + W NW R
Sbjct: 131 TMAHVLHYGALNDFLLVHVPWAPNWMKR 158
>AF348494-1|AAO15385.1| 390|Drosophila melanogaster DAP3 protein.
Length = 390
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -2
Query: 198 TVSMTIHFGSMNDFFYCY--WTRNWSGR 121
T++ +H+G++NDF + W NW R
Sbjct: 129 TMAHVLHYGALNDFLLVHVPWAPNWMKR 156
>AE013599-3396|AAF46846.1| 392|Drosophila melanogaster CG3633-PA
protein.
Length = 392
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -2
Query: 198 TVSMTIHFGSMNDFFYCY--WTRNWSGR 121
T++ +H+G++NDF + W NW R
Sbjct: 131 TMAHVLHYGALNDFLLVHVPWAPNWMKR 158
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,962,175
Number of Sequences: 53049
Number of extensions: 425789
Number of successful extensions: 959
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -