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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2374
         (529 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    24   0.84 
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    24   1.1  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    24   1.1  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   1.9  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    23   1.9  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    23   1.9  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    23   1.9  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    23   1.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   1.9  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    23   2.6  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    23   2.6  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    23   2.6  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    23   2.6  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    23   2.6  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    23   2.6  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    23   2.6  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    23   2.6  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    23   2.6  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   2.6  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    23   2.6  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    23   2.6  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    23   2.6  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   2.6  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   2.6  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   2.6  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   2.6  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   3.4  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   3.4  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   5.9  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   7.8  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   7.8  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   7.8  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   7.8  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   7.8  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   7.8  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    21   7.8  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   7.8  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   7.8  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   7.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   7.8  

>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   +E  +    +RTERE +KE
Sbjct: 282 SYKNENSYRKYRETSKERSRDRTERERSKE 311


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE +KE
Sbjct: 49  SYKNEREYRKYRETSKERSQDRTERETSKE 78


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE +KE
Sbjct: 49  SYKNEREYRKYRETSKERSQDRTERETSKE 78


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   +E  +    +RTERE ++E
Sbjct: 49  SYKNENSYRKYRETSKERSRDRTERERSRE 78


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   +E  +    +RTERE ++E
Sbjct: 271 SYKNENSYRKYRETSKERSRDRTERERSRE 300


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   +E  +    +RTERE ++E
Sbjct: 282 SYKNENSYRKYRETSKERSRDRTERERSRE 311


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   +E  +    +RTERE ++E
Sbjct: 282 SYKNENSYRKYRETSKERSRDRTERERSRE 311


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   +E  +    +RTERE ++E
Sbjct: 271 SYKNENSYRKYRETSKERSRDRTERERSRE 300


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   +E  +    +RTERE ++E
Sbjct: 282 SYKNENSYRKYRETSKERSRDRTERERSRE 311


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   ++  +    +RTERE +KE
Sbjct: 49  SYKNENSYRKYRKTSKERSRDRTERERSKE 78


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   ++  +    +RTERE +KE
Sbjct: 49  SYKNENSYRKYRKTSKERSRDRTERERSKE 78


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   ++  +    +RTERE +KE
Sbjct: 49  SYKNENSYRKYRKTSKERSRDRTERERSKE 78


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   ++  +    +RTERE +KE
Sbjct: 49  SYKNENSYRKYRKTSKERSRDRTERERSKE 78


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   ++  +    +RTERE +KE
Sbjct: 49  SYKNENSYRKYRKTSKERSRDRTERERSKE 78


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   ++  +    +RTERE +KE
Sbjct: 49  SYKNENSYRKYRKTSKERSRDRTERERSKE 78


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  ++  +E  +    +RTERE  KE
Sbjct: 49  SYKNEREYQKYRETSKERSRDRTERERCKE 78


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  ++  +E  +    +RTERE  KE
Sbjct: 49  SYKNEREYQKYRETSKERSRDRTERERCKE 78


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  ++  +E  +    +RTERE  KE
Sbjct: 49  SYKNEREYQKYRETSKERSRDRTERERCKE 78


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  ++  +E  +    +RTERE  KE
Sbjct: 49  SYKNEREYQKYRETSKERSRDRTERERCKE 78


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  ++  +E  +    +RTERE  KE
Sbjct: 49  SYKNEREYQKYRETSKERSRDRTERERCKE 78


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  ++  +E  +    +RTERE  KE
Sbjct: 49  SYKNEREYQKYRETSKERSRDRTERERCKE 78


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  ++  +E  +    +RTERE  KE
Sbjct: 49  SYKNEREYQKYRETSKERSRDRTERERCKE 78


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   +E  +    +RTERE ++E
Sbjct: 49  SYKNENSYRKYRETWKERSRDRTERERSRE 78


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   +E  +    +RTERE ++E
Sbjct: 49  SYKNENSYRKYRETWKERSRDRTERERSRE 78


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   +E  +    +RTERE ++E
Sbjct: 49  SYKNENSYRKYRETWKERSRDRTERERSRE 78


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N++++   +E  +    +RTERE ++E
Sbjct: 49  SYKNENSYRKYRETWKERSRDRTERERSRE 78


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE +KE
Sbjct: 271 SYKNEREYRKYRETSKGRSRDRTERERSKE 300


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE +KE
Sbjct: 282 SYKNEREYRKYRETSKGRSRDRTERERSKE 311


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE ++E
Sbjct: 49  SYKNEKEYRKYRETSKERSRDRTERERSRE 78


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE ++E
Sbjct: 49  SYKNEREYRKYRETSKERSRDRTERERSRE 78


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE ++E
Sbjct: 48  SYKNEREYRKYRETSKERSRDRTERERSRE 77


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE ++E
Sbjct: 49  SYKNEREYRKYRETSKERSRDRTERERSRE 78


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE ++E
Sbjct: 49  SYKNEREYRKYRETSKERSRDRTERERSRE 78


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE ++E
Sbjct: 49  SYKNEREYRKYRETSKERSRDRTERERSRE 78


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE ++E
Sbjct: 49  SYKNEREYRKYRETSKERSRDRTERERSRE 78


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE ++E
Sbjct: 49  SYKNERKYRKYRERSKERSRDRTERERSRE 78


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE ++E
Sbjct: 49  SYKNERKYRKYRERSKERSRDRTERERSRE 78


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +   +E  +    +RTERE ++E
Sbjct: 282 SYKNEREYRKYRERSKERSRDRTERERSRE 311


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 400 SVENDDTHEAQQENIRSFKDERTEREIAKE 311
           S +N+  +    E  +    +RTERE +KE
Sbjct: 282 SYKNEREYRKYGETSKERSRDRTERERSKE 311


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 417 KFIMGFYFRISKSGSR*VTYLCTV 488
           + I+ FYFR  K+ S+    LC V
Sbjct: 9   RHILLFYFRKGKNASQAHKKLCAV 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,882
Number of Sequences: 438
Number of extensions: 2891
Number of successful extensions: 43
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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