Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2372
         (662 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0381 - 2961422-2963917                                           31   0.62 
04_03_0917 + 20798977-20801369,20801578-20801581                       29   2.5  
07_03_0177 - 14770777-14772045                                         29   3.3  
02_05_0157 - 26353971-26354336,26354645-26354726,26354838-263549...    28   5.8  
10_06_0012 - 9586478-9588880                                           28   7.6  
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873...    28   7.6  
04_03_0913 + 20777859-20780309                                         28   7.6  

>01_01_0381 - 2961422-2963917
          Length = 831

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 482 SCQDRLQQCSLNPSNLLFPCHFLP 553
           SC DR+  C + P N+L    FLP
Sbjct: 620 SCHDRIIHCDIKPQNILLDASFLP 643


>04_03_0917 + 20798977-20801369,20801578-20801581
          Length = 798

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 482 SCQDRLQQCSLNPSNLLFPCHFLPPL 559
           SCQD +  C + P N+L    F+P +
Sbjct: 617 SCQDCIIHCDIKPENILLDASFVPKI 642


>07_03_0177 - 14770777-14772045
          Length = 422

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -1

Query: 551 VGNGRGREGYLG*GSTVVGDLGNWGGV*DLSDGCAVGDLGNRSTVG 414
           +G G G+ G LG G    G LG  GG+    DG   G +G    +G
Sbjct: 249 LGGGIGKGGGLGGGFGKGGGLGGGGGLGGGEDGGLGGGIGKGGGIG 294


>02_05_0157 -
           26353971-26354336,26354645-26354726,26354838-26354933,
           26355365-26356068
          Length = 415

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 21/42 (50%), Positives = 23/42 (54%)
 Frame = -1

Query: 554 VVGNGRGREGYLG*GSTVVGDLGNWGGV*DLSDGCAVGDLGN 429
           VVG G G  G  G G  VVGD G  GGV    DG A+G  G+
Sbjct: 155 VVGAGGGVVGAGGAGGGVVGDGGVGGGV---LDGGALGAGGD 193


>10_06_0012 - 9586478-9588880
          Length = 800

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 482 SCQDRLQQCSLNPSNLLFPCHFLPPL 559
           SC+D +  C + P N+L    F+P +
Sbjct: 612 SCRDCIIHCDIKPENILLDASFVPKI 637


>06_01_1069 +
           8731567-8731632,8732120-8732281,8733028-8733081,
           8733557-8733630,8733706-8733786,8734902-8735079,
           8735336-8735506,8736113-8736202,8736284-8736331,
           8736447-8736562,8736655-8736733,8737101-8737223
          Length = 413

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 402 IAKIAYSAPVAKIAYSAPIAKVSYAAPVAKIAYNSAPLTQVTFSSPA 542
           ++K   S+  A  A  AP+++   A PVA +A    P   V    PA
Sbjct: 74  LSKAKASSSGASTASKAPVSQSQPATPVASVARTPPPQAPVVTPEPA 120


>04_03_0913 + 20777859-20780309
          Length = 816

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 482 SCQDRLQQCSLNPSNLLFPCHFLPPL 559
           SCQD +  C + P N+L    F+P +
Sbjct: 619 SCQDCIIHCDIKPENILLDDLFIPKI 644


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,591,515
Number of Sequences: 37544
Number of extensions: 189396
Number of successful extensions: 747
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)