Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2370
(711 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 26 0.31
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.53
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 24 1.6
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 2.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 3.8
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 22 5.0
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 8.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 8.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.7
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 8.7
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 8.7
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 26.2 bits (55), Expect = 0.31
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -3
Query: 166 VRGNCDNLKYNLHSKIKVNDINQFSQNDLQINIEQN 59
+ GN + ++ +KV + +FS N+L ++I N
Sbjct: 87 IEGNTFKTETQVNDSLKVTRLYEFSDNELLVHISTN 122
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.4 bits (53), Expect = 0.53
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 580 LDLSKSSITSLPPNVRDLTHLVEFYLYGNKL 672
LDLS + +TS+P +RDL L L N++
Sbjct: 436 LDLSGNELTSVPDALRDLALLKTLDLGENRI 466
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 313 NLDNSSRENSEALDSVGTVSPREKYHTMREKKLSAASI 426
N + + + D + VSPR K H +R +++ AS+
Sbjct: 543 NHQTGTAKMGPSYDPMAVVSPRLKVHGIRGLRVADASV 580
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 23.4 bits (48), Expect = 2.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 585 IQSYYTFFTASNEFFNNVKISLYWFVFLSC 496
+ S Y F+A FF + + LY + +SC
Sbjct: 194 MDSSYVIFSAMGSFFLPMLVMLYVYGRISC 223
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 700 NNQILMEVQPAYSHTNKTL 644
N Q+ E+ +YS NKTL
Sbjct: 652 NVQLCSEISESYSSNNKTL 670
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 104 NIINFYLRVQVVFEIITITS 163
N++N Y+R ++V + I +TS
Sbjct: 56 NLLNAYVRFKLVTDCIFVTS 75
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 588 EIQSYYTFFTASNEF 544
E QSY+ T SNEF
Sbjct: 103 EKQSYFHIATTSNEF 117
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 588 EIQSYYTFFTASNEF 544
E QSY+ T SNEF
Sbjct: 103 EKQSYFHIATTSNEF 117
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 674 TSLFPYK*NSTKCVRSLTFGG 612
TSLFPY + +R LT G
Sbjct: 238 TSLFPYALLTILLIRGLTLPG 258
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 674 TSLFPYK*NSTKCVRSLTFGG 612
TSLFPY + +R LT G
Sbjct: 291 TSLFPYALLTILLIRGLTLPG 311
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 8.7
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 148 NLKYNL-HSKIKVNDINQFSQNDLQINIEQNVKN*WFWNSF*KPYP 14
N+ N+ H+K N I + NDL IN E+ N K YP
Sbjct: 416 NIAQNIDHAK---NTIIDYRNNDLSINEEKRTIENEQLNRMYKSYP 458
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 588 EIQSYYTFFTASNEF 544
E QSY+ T SNEF
Sbjct: 42 EKQSYFHIATTSNEF 56
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,623
Number of Sequences: 438
Number of extensions: 4236
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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