Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2363
         (750 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0377 - 22479800-22479872,22479920-22479981,22480007-224803...    29   3.0  
05_01_0013 - 85732-86829                                               28   9.1  

>02_04_0377 -
           22479800-22479872,22479920-22479981,22480007-22480300,
           22481723-22481825,22481949-22482046
          Length = 209

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/64 (28%), Positives = 34/64 (53%)
 Frame = -3

Query: 322 GSTSLKYKLVTREQNMSCVVLVC*SIIPLPSTKEHRHYIELTYTLSLYVYSIII*LDTSN 143
           G+T L   L  R + + C++ +   + P+ STKE    +   +TLSL++ S+++  D   
Sbjct: 144 GTTKLPQSLQVRSEPILCLLEMLFFLHPVGSTKEKALQM---WTLSLFLLSLVLNEDKCR 200

Query: 142 VNCY 131
           +  Y
Sbjct: 201 IGNY 204


>05_01_0013 - 85732-86829
          Length = 365

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 465 FHIYLPFIPSLDFHK*FKTKISLIGPA 545
           FH++L  +PS DF+  F+ K  L+ P+
Sbjct: 102 FHVFLNDLPSNDFNSVFRQKQKLVVPS 128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,298,363
Number of Sequences: 37544
Number of extensions: 256080
Number of successful extensions: 413
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)