Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2360
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical pr... 237 6e-63
U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical pr... 28 4.9
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 28 4.9
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 28 6.5
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 28 6.5
Z78420-2|CAB01710.3| 738|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical
protein ZC434.2 protein.
Length = 194
Score = 237 bits (579), Expect = 6e-63
Identities = 109/188 (57%), Positives = 146/188 (77%), Gaps = 1/188 (0%)
Frame = +1
Query: 16 KIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 195
K++K+ G E +SQAL++LETN D+++QL+ELYI KE+EL NK +IIIYVP+P
Sbjct: 7 KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66
Query: 196 KLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVA-NKQKRPRSRTLTSVY 372
+LKAF KI LVRELEKKF G+ ++ + R+ILPKP ++ KQKRPRSRTLT+V+
Sbjct: 67 QLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVH 126
Query: 373 DAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVT 552
DA L++LV+PAE+VG+RIRVKLDG ++ KVHLDK+ QT + HK+ F SVY+KLTG++VT
Sbjct: 127 DAWLDELVYPAEVVGRRIRVKLDGKKVYKVHLDKSHQTNVGHKIGVFASVYRKLTGKDVT 186
Query: 553 FEFPRTLF 576
FEFP +F
Sbjct: 187 FEFPDPIF 194
>U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical
protein F07F6.4 protein.
Length = 529
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 80 SNSKPTPTSKPNFGSFTLQKLKKLNYTIRSRSSSMCR 190
S+SK T F SF Q ++K YT S SSS R
Sbjct: 376 SSSKKTTKEDDFFDSFETQPVQKSRYTASSSSSSTSR 412
>Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 28.3 bits (60), Expect = 4.9
Identities = 43/202 (21%), Positives = 83/202 (41%), Gaps = 13/202 (6%)
Frame = +1
Query: 1 VKESTKIIKASGAEADSFETSISQALVELETNSDLKA-QLRELYITKAKEIELHNKKSII 177
++E+ K A+ +FE+ +Q L EL+ A QL+ + + K KE+E H +
Sbjct: 383 MEENQKQQDTIAAKQSTFESEKTQLLKELDEVKKAHANQLKSIALIK-KELEDHKAAA-- 439
Query: 178 IYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKR---PR 348
P K + Q+ +++ +K +V + + K K R + K R
Sbjct: 440 ---PSVKPTLSESEQVDALQQKFEKAEAANVSINEELRSASKELGKIRFQMQGKESDLSR 496
Query: 349 SRTLTSVYDAILEDLVFPA---------EIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHK 501
R +T A L+ +V + E+ + V+L +++ K+H DK +
Sbjct: 497 ERKMTEALSAQLQSVVSSSQEEALKKEEELKKLKATVELQQAEIEKMHEDKKEADQKFKN 556
Query: 502 VDTFQSVYKKLTGREVTFEFPR 567
++ + Y+ E+ E R
Sbjct: 557 LEKEYAAYRDEQRPEIKTELER 578
>Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical
protein C14H10.2b protein.
Length = 412
Score = 28.3 bits (60), Expect = 4.9
Identities = 43/202 (21%), Positives = 83/202 (41%), Gaps = 13/202 (6%)
Frame = +1
Query: 1 VKESTKIIKASGAEADSFETSISQALVELETNSDLKA-QLRELYITKAKEIELHNKKSII 177
++E+ K A+ +FE+ +Q L EL+ A QL+ + + K KE+E H +
Sbjct: 49 MEENQKQQDTIAAKQSTFESEKTQLLKELDEVKKAHANQLKSIALIK-KELEDHKAAA-- 105
Query: 178 IYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKR---PR 348
P K + Q+ +++ +K +V + + K K R + K R
Sbjct: 106 ---PSVKPTLSESEQVDALQQKFEKAEAANVSINEELRSASKELGKIRFQMQGKESDLSR 162
Query: 349 SRTLTSVYDAILEDLVFPA---------EIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHK 501
R +T A L+ +V + E+ + V+L +++ K+H DK +
Sbjct: 163 ERKMTEALSAQLQSVVSSSQEEALKKEEELKKLKATVELQQAEIEKMHEDKKEADQKFKN 222
Query: 502 VDTFQSVYKKLTGREVTFEFPR 567
++ + Y+ E+ E R
Sbjct: 223 LEKEYAAYRDEQRPEIKTELER 244
>Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 28.3 bits (60), Expect = 4.9
Identities = 43/202 (21%), Positives = 83/202 (41%), Gaps = 13/202 (6%)
Frame = +1
Query: 1 VKESTKIIKASGAEADSFETSISQALVELETNSDLKA-QLRELYITKAKEIELHNKKSII 177
++E+ K A+ +FE+ +Q L EL+ A QL+ + + K KE+E H +
Sbjct: 383 MEENQKQQDTIAAKQSTFESEKTQLLKELDEVKKAHANQLKSIALIK-KELEDHKAAA-- 439
Query: 178 IYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKR---PR 348
P K + Q+ +++ +K +V + + K K R + K R
Sbjct: 440 ---PSVKPTLSESEQVDALQQKFEKAEAANVSINEELRSASKELGKIRFQMQGKESDLSR 496
Query: 349 SRTLTSVYDAILEDLVFPA---------EIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHK 501
R +T A L+ +V + E+ + V+L +++ K+H DK +
Sbjct: 497 ERKMTEALSAQLQSVVSSSQEEALKKEEELKKLKATVELQQAEIEKMHEDKKEADQKFKN 556
Query: 502 VDTFQSVYKKLTGREVTFEFPR 567
++ + Y+ E+ E R
Sbjct: 557 LEKEYAAYRDEQRPEIKTELER 578
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 1 VKESTKIIKASGAEADSFE---TSISQALVELETNSDLKAQLRELYITKAKEIELHNKKS 171
+K + K K AEA+ ++ T S+ L ELE Q +E + K++E+E+ NK+
Sbjct: 242 LKANEKARKEIEAEAEKWKDRATRNSKRLPELELELAETVQAKEEWQVKSQEMEIQNKQL 301
Query: 172 I 174
+
Sbjct: 302 V 302
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 430 VKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEF 561
VK+ GS +D Q+T K+DTF+ +++ R + + F
Sbjct: 379 VKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDTKNRPLLYNF 422
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 430 VKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEF 561
VK+ GS +D Q+T K+DTF+ +++ R + + F
Sbjct: 392 VKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDTKNRPLLYNF 435
>Z78420-2|CAB01710.3| 738|Caenorhabditis elegans Hypothetical
protein F45H11.3 protein.
Length = 738
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3
Query: 102 VGVGFEFDQRLRDRGLEGIRLSTARFDDL 16
V VGFE RLRD+GL +LS +D L
Sbjct: 522 VEVGFENWIRLRDKGLSHSQLSCQLYDTL 550
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,337,619
Number of Sequences: 27780
Number of extensions: 272739
Number of successful extensions: 850
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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