Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2360
(638 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 26 0.35
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.62
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.62
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.62
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 4.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 5.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 5.8
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 25.8 bits (54), Expect = 0.35
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 46 DSFETSISQALVELETNSDLKAQLRE 123
++ T++S AL EL N D++ +LRE
Sbjct: 307 ETSSTTMSNALYELALNQDVQKKLRE 332
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.0 bits (52), Expect = 0.62
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 358 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYK 528
L S Y+ ++ +V ++++ R+ +KL SQLI V+L KNQ T V+ YK
Sbjct: 36 LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 89
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.0 bits (52), Expect = 0.62
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 358 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYK 528
L S Y+ ++ +V ++++ R+ +KL SQLI V+L KNQ T V+ YK
Sbjct: 36 LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 89
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.0 bits (52), Expect = 0.62
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 522 IQEANGTRSYLRVPPNLICKPSL*LYN 602
+ + G R LR+PP+ + KP + +YN
Sbjct: 89 VSDYGGVRD-LRIPPHRLWKPDVLMYN 114
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 552 LRVPPNLICKPSL*LYN 602
LR+ PN + KP + +YN
Sbjct: 61 LRITPNKLWKPDILMYN 77
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 552 LRVPPNLICKPSL*LYN 602
LR+ PN + KP + +YN
Sbjct: 61 LRITPNKLWKPDILMYN 77
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 552 LRVPPNLICKPSL*LYN 602
LR+ PN + KP + +YN
Sbjct: 61 LRITPNKLWKPDILMYN 77
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 552 LRVPPNLICKPSL*LYN 602
LR+ PN + KP + +YN
Sbjct: 61 LRITPNKLWKPDILMYN 77
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 552 LRVPPNLICKPSL*LYN 602
LR+ PN + KP + +YN
Sbjct: 61 LRITPNKLWKPDILMYN 77
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 552 LRVPPNLICKPSL*LYN 602
LR+ PN + KP + +YN
Sbjct: 61 LRITPNKLWKPDILMYN 77
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 552 LRVPPNLICKPSL*LYN 602
LR+PP+ + KP + L+N
Sbjct: 101 LRLPPDKVWKPDIVLFN 117
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 552 LRVPPNLICKPSL*LYN 602
LR+ PN + KP + +YN
Sbjct: 129 LRITPNKLWKPDILMYN 145
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 552 LRVPPNLICKPSL*LYN 602
LR+ PN + KP + +YN
Sbjct: 129 LRITPNKLWKPDILMYN 145
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.2 bits (45), Expect = 4.4
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 358 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYK 528
L S Y+ ++ +V + + +++KL SQLI V+L KNQ T V+ YK
Sbjct: 32 LLSNYNKLVRPVVNVTDAL--TVKIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 85
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 5.8
Identities = 16/78 (20%), Positives = 32/78 (41%)
Frame = +1
Query: 151 ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVAN 330
EL KS + +P+P + + + +KK +G F + + + +
Sbjct: 552 ELKRLKSTVSLLPLPLARTPSVMSASSTCKKDKKNAGSGSRFTIYKANKASKKKREKSSA 611
Query: 331 KQKRPRSRTLTSVYDAIL 384
K++R ++TL V L
Sbjct: 612 KKERKATKTLAIVLGVFL 629
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 507 HLPVCIQEANGTRSYLRVPPNLICKPSL*LYN 602
HL E G R +RVP N + +P LYN
Sbjct: 66 HLKWNASEFAGIR-VIRVPYNRVWRPDTILYN 96
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,771
Number of Sequences: 438
Number of extensions: 2846
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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