Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2355
(382 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 47 4e-06
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 47 4e-06
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 43 9e-05
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 40 8e-04
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 40 8e-04
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 40 8e-04
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 39 0.001
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 38 0.002
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 38 0.002
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 38 0.002
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 36 0.010
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 34 0.030
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 32 0.12
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 32 0.16
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 31 0.21
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 31 0.28
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 31 0.28
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 31 0.28
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 31 0.28
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 30 0.49
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 29 0.85
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p... 28 2.6
U97401-1|AAB52466.2| 336|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z75553-3|CAA99948.1| 407|Caenorhabditis elegans Hypothetical pr... 27 3.4
AF016685-7|AAG24151.1| 341|Caenorhabditis elegans Seven tm rece... 27 3.4
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 47.2 bits (107), Expect = 4e-06
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = +3
Query: 219 IIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQR 380
++ ND + V+++V +F P+E+KV + + + +EGKH E D + HFV++
Sbjct: 50 VVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRK 103
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 47.2 bits (107), Expect = 4e-06
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = +3
Query: 219 IIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQR 380
++ ND + V+++V +F P+E+KV + + + +EGKH E D + HFV++
Sbjct: 49 VVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRK 102
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 42.7 bits (96), Expect = 9e-05
Identities = 14/38 (36%), Positives = 29/38 (76%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKH 329
+I+ ++DK VN+NV F P+E+KV ++ + ++++G+H
Sbjct: 44 EIMNSNDKFAVNLNVSNFKPEELKVNLEGRQLSIQGEH 81
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 39.5 bits (88), Expect = 8e-04
Identities = 11/39 (28%), Positives = 28/39 (71%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHK 332
+I+ ND K +N+NV +F P+++K+ + + ++++G+ +
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQE 80
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 39.5 bits (88), Expect = 8e-04
Identities = 12/39 (30%), Positives = 27/39 (69%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHK 332
QI+ ND K +N+NV +F P+++K+ + ++++G+ +
Sbjct: 43 QIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQE 81
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 39.5 bits (88), Expect = 8e-04
Identities = 11/39 (28%), Positives = 28/39 (71%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHK 332
+I+ ND K +N+NV +F P+++K+ + + ++++G+ +
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQE 80
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 222 IANDDK-LEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQR 380
+ NDD+ V+M+ +F P+EI+V + + +EG+H++ D F +FV++
Sbjct: 107 VVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRK 160
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 38.3 bits (85), Expect = 0.002
Identities = 11/39 (28%), Positives = 27/39 (69%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHK 332
+I+ ND K +N+NV +F P+++K+ + ++++G+ +
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQE 80
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 38.3 bits (85), Expect = 0.002
Identities = 11/39 (28%), Positives = 27/39 (69%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHK 332
+I+ ND K +N+NV +F P+++K+ + ++++G+ +
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQE 80
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 38.3 bits (85), Expect = 0.002
Identities = 11/39 (28%), Positives = 27/39 (69%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHK 332
+I+ ND K +N+NV +F P+++K+ + ++++G+ +
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQE 80
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 35.9 bits (79), Expect = 0.010
Identities = 11/40 (27%), Positives = 27/40 (67%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKE 335
+I+ +K VN+NV P+E+K+ ++ + ++++ +H+E
Sbjct: 43 EIVDTHEKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQE 82
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 34.3 bits (75), Expect = 0.030
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 237 KLEVNMNVKRFSPDEIKVTVKNKYITVEGKHK---EAGDIKKFLTNHF 371
K V ++V F P+E+KV ++ +T+EG H+ E G K+ T F
Sbjct: 52 KFCVKLDVAAFKPEELKVNLEGHVLTIEGHHEVKTEHGFSKRSFTRQF 99
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 32.3 bits (70), Expect = 0.12
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEG 323
QI+ ++ K V ++V F P+++K+ + + + +EG
Sbjct: 47 QIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 82
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 31.9 bits (69), Expect = 0.16
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 252 MNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQR 380
++V ++ D +KVTV + I VEG H E D + + F +R
Sbjct: 85 LDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRR 127
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 31.5 bits (68), Expect = 0.21
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEG 323
QI+ ++ K V ++V F P+ +K+ + + + +EG
Sbjct: 47 QIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEG 82
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 31.1 bits (67), Expect = 0.28
Identities = 9/36 (25%), Positives = 23/36 (63%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEG 323
+I+ ++ K V ++V F P+++K+ + + + +EG
Sbjct: 38 EIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 73
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 31.1 bits (67), Expect = 0.28
Identities = 9/36 (25%), Positives = 23/36 (63%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEG 323
+I+ ++ K V ++V F P+++K+ + + + +EG
Sbjct: 46 EIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 81
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 31.1 bits (67), Expect = 0.28
Identities = 9/36 (25%), Positives = 23/36 (63%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEG 323
+I+ ++ K V ++V F P+++K+ + + + +EG
Sbjct: 46 EIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 81
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 31.1 bits (67), Expect = 0.28
Identities = 9/36 (25%), Positives = 23/36 (63%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEG 323
+I+ ++ K V ++V F P+++K+ + + + +EG
Sbjct: 46 EIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 81
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 30.3 bits (65), Expect = 0.49
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = +3
Query: 216 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEG 323
+I+ ++ K V ++V F P+ +K+ + + + +EG
Sbjct: 46 EIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEG 81
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 29.5 bits (63), Expect = 0.85
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +3
Query: 219 IIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEG 323
I+ ++ K V ++V F P+ +K+ + + + +EG
Sbjct: 1 IVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEG 35
>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
protein Y41E3.9 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 35 TSRCVTKCGLLPEQKTQGRGSLRGTRQTCVKHSCLSLF 148
T++CV PE + + LR VK+ CL+ F
Sbjct: 1375 TNKCVLLLKKFPELRAESENCLRVIHSAMVKNECLNAF 1412
>U97401-1|AAB52466.2| 336|Caenorhabditis elegans Hypothetical
protein F21A9.2 protein.
Length = 336
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 14 NNAKKRLTSRCVTKCGLLPEQKTQGRGSLRGTRQTCVKHSCL 139
N++ +++ +C TKC +P +Q +R + QT +CL
Sbjct: 261 NDSLRKVPEKC-TKCDFVPTSSSQLSMHIRSSHQTTKTFTCL 301
>Z75553-3|CAA99948.1| 407|Caenorhabditis elegans Hypothetical
protein ZC443.3 protein.
Length = 407
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 213 PQIIANDDKLEVNMNVKRFSPDEIKVTVKNK 305
P I +DKL++ V+ + DEI V KNK
Sbjct: 174 PTISLEEDKLDIKDVVESMASDEIPVEEKNK 204
>AF016685-7|AAG24151.1| 341|Caenorhabditis elegans Seven tm
receptor protein 86 protein.
Length = 341
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -3
Query: 347 YVAGFLMLSFDRDVFVFHCYFDLIRTESLHVHVHFKFVVICDYLRL 210
YV+ +L F D F YF LI L VH +++VV+CD+ ++
Sbjct: 79 YVSRYLAPIFLIDFCAF--YFTLILL--LVVHFIYRYVVVCDFKKM 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,243,905
Number of Sequences: 27780
Number of extensions: 119386
Number of successful extensions: 356
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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