Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2353
(457 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002849-1|AAH02849.1| 177|Homo sapiens coatomer protein comple... 31 1.9
AF151878-1|AAD34115.1| 177|Homo sapiens CGI-120 protein protein. 31 1.9
AF086911-1|AAP97141.1| 177|Homo sapiens z-cop protein. 31 1.9
AB047848-1|BAB17659.1| 177|Homo sapiens zeta1-COP protein. 31 1.9
D82060-1|BAA11528.1| 429|Homo sapiens membrane protein with his... 31 2.5
BC000645-1|AAH00645.1| 469|Homo sapiens solute carrier family 3... 31 2.5
AL844527-11|CAI41839.1| 469|Homo sapiens solute carrier family ... 31 2.5
AL662824-23|CAI17615.1| 469|Homo sapiens solute carrier family ... 31 2.5
AL645940-9|CAI18067.1| 469|Homo sapiens solute carrier family 3... 31 2.5
AL031228-11|CAA20238.1| 469|Homo sapiens solute carrier family ... 31 2.5
AF117221-1|AAD12305.1| 429|Homo sapiens KE4 protein protein. 31 2.5
AK223188-1|BAD96908.1| 177|Homo sapiens coatomer protein comple... 29 5.7
AK130723-1|BAC85414.1| 155|Homo sapiens protein ( Homo sapiens ... 29 10.0
>BC002849-1|AAH02849.1| 177|Homo sapiens coatomer protein complex,
subunit zeta 1 protein.
Length = 177
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 257 SHLLKHPLEKGKLEQNLKLIHPETEHKHGGGLVLEDDRHNIEHHIAFAG 403
S +L+ +EK L +N++ + + GG++LE D + H +A G
Sbjct: 102 SQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRG 150
>AF151878-1|AAD34115.1| 177|Homo sapiens CGI-120 protein protein.
Length = 177
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 257 SHLLKHPLEKGKLEQNLKLIHPETEHKHGGGLVLEDDRHNIEHHIAFAG 403
S +L+ +EK L +N++ + + GG++LE D + H +A G
Sbjct: 102 SQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRG 150
>AF086911-1|AAP97141.1| 177|Homo sapiens z-cop protein.
Length = 177
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 257 SHLLKHPLEKGKLEQNLKLIHPETEHKHGGGLVLEDDRHNIEHHIAFAG 403
S +L+ +EK L +N++ + + GG++LE D + H +A G
Sbjct: 102 SQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRG 150
>AB047848-1|BAB17659.1| 177|Homo sapiens zeta1-COP protein.
Length = 177
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 257 SHLLKHPLEKGKLEQNLKLIHPETEHKHGGGLVLEDDRHNIEHHIAFAG 403
S +L+ +EK L +N++ + + GG++LE D + H +A G
Sbjct: 102 SQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRG 150
>D82060-1|BAA11528.1| 429|Homo sapiens membrane protein with
histidine rich charge clusters protein.
Length = 429
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +2
Query: 95 IHDEAPQVEAKYDHQSLFGEFGHHHQIEHEHAKFYQSIKFEHFHPVPVYVKKEHSHL-LK 271
+HD+ + + H+ +F H H H H ++SI H H HSH L
Sbjct: 34 LHDDLQEDFHGHSHRHSHEDFHHGHSHAHGHGHTHESIWHGHTHD----HDHGHSHEDLH 89
Query: 272 HPLEKGKLEQNL--KLIHPETEHKHGG 346
H G ++L + + EH HGG
Sbjct: 90 HGHSHGYSHESLYHRGHGHDHEHSHGG 116
>BC000645-1|AAH00645.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +2
Query: 95 IHDEAPQVEAKYDHQSLFGEFGHHHQIEHEHAKFYQSIKFEHFHPVPVYVKKEHSHL-LK 271
+HD+ + + H+ +F H H H H ++SI H H HSH L
Sbjct: 34 LHDDLQEDFHGHSHRHSHEDFHHGHSHAHGHGHTHESIWHGHTHD----HDHGHSHEDLH 89
Query: 272 HPLEKGKLEQNL--KLIHPETEHKHGG 346
H G ++L + + EH HGG
Sbjct: 90 HGHSHGYSHESLYHRGHGHDHEHSHGG 116
>AL844527-11|CAI41839.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +2
Query: 95 IHDEAPQVEAKYDHQSLFGEFGHHHQIEHEHAKFYQSIKFEHFHPVPVYVKKEHSHL-LK 271
+HD+ + + H+ +F H H H H ++SI H H HSH L
Sbjct: 34 LHDDLQEDFHGHSHRHSHEDFHHGHSHAHGHGHTHESIWHGHTHD----HDHGHSHEDLH 89
Query: 272 HPLEKGKLEQNL--KLIHPETEHKHGG 346
H G ++L + + EH HGG
Sbjct: 90 HGHSHGYSHESLYHRGHGHDHEHSHGG 116
>AL662824-23|CAI17615.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +2
Query: 95 IHDEAPQVEAKYDHQSLFGEFGHHHQIEHEHAKFYQSIKFEHFHPVPVYVKKEHSHL-LK 271
+HD+ + + H+ +F H H H H ++SI H H HSH L
Sbjct: 34 LHDDLQEDFHGHSHRHSHEDFHHGHSHAHGHGHTHESIWHGHTHD----HDHGHSHEDLH 89
Query: 272 HPLEKGKLEQNL--KLIHPETEHKHGG 346
H G ++L + + EH HGG
Sbjct: 90 HGHSHGYSHESLYHRGHGHDHEHSHGG 116
>AL645940-9|CAI18067.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +2
Query: 95 IHDEAPQVEAKYDHQSLFGEFGHHHQIEHEHAKFYQSIKFEHFHPVPVYVKKEHSHL-LK 271
+HD+ + + H+ +F H H H H ++SI H H HSH L
Sbjct: 34 LHDDLQEDFHGHSHRHSHEDFHHGHSHAHGHGHTHESIWHGHTHD----HDHGHSHEDLH 89
Query: 272 HPLEKGKLEQNL--KLIHPETEHKHGG 346
H G ++L + + EH HGG
Sbjct: 90 HGHSHGYSHESLYHRGHGHDHEHSHGG 116
>AL031228-11|CAA20238.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +2
Query: 95 IHDEAPQVEAKYDHQSLFGEFGHHHQIEHEHAKFYQSIKFEHFHPVPVYVKKEHSHL-LK 271
+HD+ + + H+ +F H H H H ++SI H H HSH L
Sbjct: 34 LHDDLQEDFHGHSHRHSHEDFHHGHSHAHGHGHTHESIWHGHTHD----HDHGHSHEDLH 89
Query: 272 HPLEKGKLEQNL--KLIHPETEHKHGG 346
H G ++L + + EH HGG
Sbjct: 90 HGHSHGYSHESLYHRGHGHDHEHSHGG 116
>AF117221-1|AAD12305.1| 429|Homo sapiens KE4 protein protein.
Length = 429
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +2
Query: 95 IHDEAPQVEAKYDHQSLFGEFGHHHQIEHEHAKFYQSIKFEHFHPVPVYVKKEHSHL-LK 271
+HD+ + + H+ +F H H H H ++SI H H HSH L
Sbjct: 34 LHDDLQEDFHGHSHRHSHEDFHHGHSHAHGHGHTHESIWHGHTHD----HDHGHSHEDLH 89
Query: 272 HPLEKGKLEQNL--KLIHPETEHKHGG 346
H G ++L + + EH HGG
Sbjct: 90 HGHSHGYSHESLYHRGHGHDHEHSHGG 116
>AK223188-1|BAD96908.1| 177|Homo sapiens coatomer protein complex,
subunit zeta 1 variant protein.
Length = 177
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 263 LLKHPLEKGKLEQNLKLIHPETEHKHGGGLVLEDDRHNIEHHIAFAG 403
+L+ +EK L +N++ + + GG++LE D + H +A G
Sbjct: 104 MLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRG 150
>AK130723-1|BAC85414.1| 155|Homo sapiens protein ( Homo sapiens
cDNA FLJ27213 fis, clone SYN03652. ).
Length = 155
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 377 CCVCRPREQVHRRACVQSLGESA*GFALIFPF 282
CC+C P +H AC +G SA G L+ PF
Sbjct: 119 CCLCSPPAGLHTNAC-DDIGPSASG-DLLHPF 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,683,255
Number of Sequences: 237096
Number of extensions: 1615199
Number of successful extensions: 7640
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7596
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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