Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2339
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119199-1|AAM51059.1|  381|Drosophila melanogaster SD12984p pro...   156   2e-38
AE014134-985|AAF52302.4| 3489|Drosophila melanogaster CG14001-PA...   156   2e-38
AE014298-1574|AAN09290.1|  863|Drosophila melanogaster CG32668-P...    29   6.2  

>AY119199-1|AAM51059.1|  381|Drosophila melanogaster SD12984p
           protein.
          Length = 381

 Score =  156 bits (379), Expect = 2e-38
 Identities = 70/96 (72%), Positives = 85/96 (88%)
 Frame = +1

Query: 409 VQLGLMHLKKLFAEYTHPQQPLTDAEKDDKLYNMLPLFCKVIGTSPSSEMNEKFWDILSF 588
           VQ+ L  LKKLF EYTHP++PL++ E+DDKLY MLPLFCKV  + PS++M+EKFWD+++F
Sbjct: 60  VQVSLTTLKKLFNEYTHPREPLSEQERDDKLYEMLPLFCKVFSSCPSNDMSEKFWDVVAF 119

Query: 589 CQQVSKLMVSEIRKRASNQSTEAASCAIAKFLEIET 696
           CQQVS+LMVSEIRKRASNQSTEAAS AI KFLE+ET
Sbjct: 120 CQQVSRLMVSEIRKRASNQSTEAASIAIVKFLEVET 155


>AE014134-985|AAF52302.4| 3489|Drosophila melanogaster CG14001-PA
           protein.
          Length = 3489

 Score =  156 bits (379), Expect = 2e-38
 Identities = 70/96 (72%), Positives = 85/96 (88%)
 Frame = +1

Query: 409 VQLGLMHLKKLFAEYTHPQQPLTDAEKDDKLYNMLPLFCKVIGTSPSSEMNEKFWDILSF 588
           VQ+ L  LKKLF EYTHP++PL++ E+DDKLY MLPLFCKV  + PS++M+EKFWD+++F
Sbjct: 58  VQVSLTTLKKLFNEYTHPREPLSEQERDDKLYEMLPLFCKVFSSCPSNDMSEKFWDVVAF 117

Query: 589 CQQVSKLMVSEIRKRASNQSTEAASCAIAKFLEIET 696
           CQQVS+LMVSEIRKRASNQSTEAAS AI KFLE+ET
Sbjct: 118 CQQVSRLMVSEIRKRASNQSTEAASIAIVKFLEVET 153


>AE014298-1574|AAN09290.1|  863|Drosophila melanogaster CG32668-PA
           protein.
          Length = 863

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 12/107 (11%)
 Frame = +1

Query: 406 HVQLGLMHLKKLFAEYTHPQQPLTDAEKDDKLYNMLPLFCKVIGTSPSSEMNEKFWDILS 585
           H  LG +H    + +     QPL +      + ++     KV+G   +S    +   +L 
Sbjct: 602 HATLGALHNLCFYQDKQAAVQPLAEGSLQSLIDDLSASLAKVLGNCQTSVTKVELARVLG 661

Query: 586 -----------FCQQVS-KLMVSEIRKRASNQSTEAASCAIAKFLEI 690
                      FC      LMV ++ K+A+ Q  E  +CAI   + +
Sbjct: 662 NLTRNEQARRCFCAAGGLPLMVQQLTKQAAGQDYELRTCAIGVLVNL 708


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,415,107
Number of Sequences: 53049
Number of extensions: 490739
Number of successful extensions: 890
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)