Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2337
         (322 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0139 + 15145310-15145622,15145820-15145881,15145975-151463...    27   4.3  
01_04_0050 + 15427437-15427547,15427653-15427804,15427909-154281...    27   4.3  
08_02_1554 + 27841801-27842007,27842282-27842455,27842554-278426...    26   5.7  
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279...    26   5.7  

>10_08_0139 +
           15145310-15145622,15145820-15145881,15145975-15146355,
           15146413-15146929,15147031-15147161
          Length = 467

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -2

Query: 207 LHLHGFHNYFVGRISG 160
           +HLHGF  Y VGR SG
Sbjct: 370 MHLHGFAFYVVGRGSG 385


>01_04_0050 +
           15427437-15427547,15427653-15427804,15427909-15428175,
           15428181-15428214,15428282-15429386,15429482-15429612
          Length = 599

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -2

Query: 207 LHLHGFHNYFVGRISG 160
           +HLHGF  Y VGR SG
Sbjct: 502 MHLHGFTFYVVGRGSG 517


>08_02_1554 +
           27841801-27842007,27842282-27842455,27842554-27842653,
           27843273-27843725,27843936-27844469,27844500-27844580,
           27844690-27844781,27844890-27844963,27845071-27845293,
           27845429-27845522,27845607-27845761,27845899-27846129,
           27846803-27847003,27847257-27847382,27847497-27847558,
           27847775-27847892,27848040-27848324,27848475-27848513
          Length = 1082

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 163 RDAAYKIIMEAMEMQCVKEVVGKIRSLRNTYN 258
           R+A  K  +E  E+QC KEV+ +I S  + Y+
Sbjct: 694 REALLKHHVEEHELQCSKEVLSEIASKCDGYD 725


>03_05_0640 - 26326832-26327166,26327295-26327529,26327665-26327908,
            26328389-26328507,26328860-26329050,26329133-26329220,
            26331653-26331715,26331816-26333944,26334084-26334186
          Length = 1168

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
 Frame = +3

Query: 33   ALQVLKMANQR---WSTEKNIQFINEYHRQAVSV 125
            AL VL+ A++R   WS E+N+Q +   H+ A+++
Sbjct: 1009 ALAVLRAASERMESWSREENMQKLLPQHQLAIAL 1042


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,791,313
Number of Sequences: 37544
Number of extensions: 168431
Number of successful extensions: 352
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)