Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2337
(322 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY034078-1|AAK59694.1| 100|Homo sapiens ASPL/TFE3 type 2 fusion... 31 0.58
X97160-1|CAA65800.1| 470|Homo sapiens TFE3 transcription factor... 29 3.1
X96717-1|CAA65478.1| 575|Homo sapiens transcription factor TFE3... 29 3.1
X51330-1|CAA35714.1| 536|Homo sapiens protein ( Human mRNA for ... 29 3.1
BX572102-1|CAI95779.1| 575|Homo sapiens transcription factor bi... 29 3.1
BC026027-1|AAH26027.1| 575|Homo sapiens transcription factor bi... 29 3.1
AL132655-2|CAC07996.1| 245|Homo sapiens GNAS complex locus prot... 29 4.1
AJ251760-1|CAB83214.1| 245|Homo sapiens neuroendocrine secretor... 29 4.1
AJ009849-1|CAA08889.1| 245|Homo sapiens neuroendocrine secretor... 29 4.1
AF105253-1|AAF63226.1| 245|Homo sapiens neuroendocrine secretor... 29 4.1
AK131213-1|BAD18403.1| 197|Homo sapiens protein ( Homo sapiens ... 27 9.5
>AY034078-1|AAK59694.1| 100|Homo sapiens ASPL/TFE3 type 2 fusion
protein protein.
Length = 100
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +1
Query: 127 DPKHLQYKNRDARDAAYKIIMEAMEMQCVKEVVGKIRSLRNTYNNELLKAKKSNTTGME 303
DP+ Q + R+ RD + E + + +V+ +I SL ++YN+E+L TTG++
Sbjct: 8 DPQQEQEQERE-RDP-----QQEQERERIDDVIDEIISLESSYNDEMLSYLPGGTTGLQ 60
>X97160-1|CAA65800.1| 470|Homo sapiens TFE3 transcription factor
protein.
Length = 470
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 211 VKEVVGKIRSLRNTYNNELLKAKKSNTTGME 303
+ +V+ +I SL ++YN+E+L TTG++
Sbjct: 113 IDDVIDEIISLESSYNDEMLSYLPGGTTGLQ 143
>X96717-1|CAA65478.1| 575|Homo sapiens transcription factor TFE3
protein.
Length = 575
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 211 VKEVVGKIRSLRNTYNNELLKAKKSNTTGME 303
+ +V+ +I SL ++YN+E+L TTG++
Sbjct: 261 IDDVIDEIISLESSYNDEMLSYLPGGTTGLQ 291
>X51330-1|CAA35714.1| 536|Homo sapiens protein ( Human mRNA for
transcription factor TFE3 (partial). ).
Length = 536
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 211 VKEVVGKIRSLRNTYNNELLKAKKSNTTGME 303
+ +V+ +I SL ++YN+E+L TTG++
Sbjct: 54 IDDVIDEIISLESSYNDEMLSYLPGGTTGLQ 84
>BX572102-1|CAI95779.1| 575|Homo sapiens transcription factor
binding to IGHM enhancer 3 protein.
Length = 575
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 211 VKEVVGKIRSLRNTYNNELLKAKKSNTTGME 303
+ +V+ +I SL ++YN+E+L TTG++
Sbjct: 261 IDDVIDEIISLESSYNDEMLSYLPGGTTGLQ 291
>BC026027-1|AAH26027.1| 575|Homo sapiens transcription factor
binding to IGHM enhancer 3 protein.
Length = 575
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 211 VKEVVGKIRSLRNTYNNELLKAKKSNTTGME 303
+ +V+ +I SL ++YN+E+L TTG++
Sbjct: 261 IDDVIDEIISLESSYNDEMLSYLPGGTTGLQ 291
>AL132655-2|CAC07996.1| 245|Homo sapiens GNAS complex locus
protein.
Length = 245
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 54 ANQRWSTEKNIQFINEYHRQAVSVGPETP 140
A QR + ++ F+N +HR V PE+P
Sbjct: 52 AQQRAAAQQRRSFLNAHHRSGAQVFPESP 80
>AJ251760-1|CAB83214.1| 245|Homo sapiens neuroendocrine secretory
protein 55 protein.
Length = 245
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 54 ANQRWSTEKNIQFINEYHRQAVSVGPETP 140
A QR + ++ F+N +HR V PE+P
Sbjct: 52 AQQRAAAQQRRSFLNAHHRSGAQVFPESP 80
>AJ009849-1|CAA08889.1| 245|Homo sapiens neuroendocrine secretory
protein 55 (NESP55) protein.
Length = 245
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 54 ANQRWSTEKNIQFINEYHRQAVSVGPETP 140
A QR + ++ F+N +HR V PE+P
Sbjct: 52 AQQRAAAQQRRSFLNAHHRSGAQVFPESP 80
>AF105253-1|AAF63226.1| 245|Homo sapiens neuroendocrine secretory
protein 55 protein.
Length = 245
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 54 ANQRWSTEKNIQFINEYHRQAVSVGPETP 140
A QR + ++ F+N +HR V PE+P
Sbjct: 52 AQQRAAAQQRRSFLNAHHRSGAQVFPESP 80
>AK131213-1|BAD18403.1| 197|Homo sapiens protein ( Homo sapiens
cDNA FLJ16097 fis, clone SYNOV2001660. ).
Length = 197
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = +3
Query: 156 GCPRCGLQNNYGSHGDAM---CQRSCW 227
GCP L +GSHG+ + C+R W
Sbjct: 43 GCPGRNLLQGWGSHGEPLLGQCRREMW 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,613,637
Number of Sequences: 237096
Number of extensions: 977231
Number of successful extensions: 1784
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1784
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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