Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2333
(455 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0410 - 3111899-3112513,3112907-3112962,3113884-3114355 35 0.027
03_02_0097 + 5602912-5603293,5604599-5604676,5604935-5604963 34 0.047
03_06_0437 - 33912326-33912520,33912870-33912998,33913147-339133... 33 0.082
05_07_0359 - 29539294-29540832,29542366-29542518 30 1.0
04_04_0433 + 25163111-25163471,25163943-25164154,25164420-251647... 29 1.3
05_04_0319 + 20171486-20171800,20171882-20171956,20172160-201721... 29 1.8
04_01_0009 - 178579-178638,179151-179246,179504-179565,180181-18... 29 2.3
03_02_0898 - 12246747-12246833,12247425-12247601,12248054-122481... 29 2.3
02_01_0232 + 1543597-1543800,1544189-1544377,1544695-1544859,154... 29 2.3
09_03_0216 - 13529869-13530894 28 4.1
07_03_0314 + 16669072-16669553,16669936-16671106,16671394-166720... 28 4.1
11_01_0397 + 3006815-3007438 27 5.4
08_01_0072 - 513561-513926,514055-514189,514274-514417,514505-51... 27 5.4
07_01_1055 - 9253936-9254130,9254271-9254483,9254588-9254758,925... 27 5.4
07_01_0262 + 1957973-1958220,1958272-1958935 27 5.4
04_04_0910 - 29321128-29321276,29321977-29322508,29323301-293237... 27 5.4
07_03_0832 - 21823518-21823826,21823920-21824070,21824148-218243... 27 7.2
07_01_0119 - 908600-909592,909685-909885 27 7.2
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 27 7.2
03_06_0626 - 35169352-35169546,35169736-35169948,35170102-351702... 27 7.2
03_05_1048 - 29950860-29951396,29951810-29952676 27 7.2
03_02_0371 + 7858170-7859624 27 7.2
02_05_0570 + 30070338-30071606 27 7.2
11_04_0125 + 13723966-13724011,13724282-13724430,13725100-137251... 27 9.5
11_01_0521 + 4083594-4083763,4083765-4083963,4084059-4084244,408... 27 9.5
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 27 9.5
04_04_0903 - 29269794-29270141,29270227-29270751 27 9.5
01_06_1626 - 38734128-38734160,38734386-38734560,38734819-387348... 27 9.5
>11_01_0410 - 3111899-3112513,3112907-3112962,3113884-3114355
Length = 380
Score = 35.1 bits (77), Expect = 0.027
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = +1
Query: 10 RSNHPSASEGGGERVTPDA--GFGPRRSISPAVTQRERRSDAPVTIAQRPVIRHLRTRPV 183
RS HP A EGGG R + A G G RR +R ++ + V ++ +
Sbjct: 54 RSRHPRAREGGGRRASWPAGCGHGGRRGCGNGKRERRQQGEEGVAVSPKAAAAGGGKETT 113
Query: 184 EVQQLPRRRDPQHAECALQARSRPG 258
++ RRR+ A + S G
Sbjct: 114 AAMRVRRRREASSAAARDASSSAAG 138
>03_02_0097 + 5602912-5603293,5604599-5604676,5604935-5604963
Length = 162
Score = 34.3 bits (75), Expect = 0.047
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Frame = +1
Query: 4 ISRS-NHPSASEG---GGERVTPDAGFGPRRSISPAVTQRERRSDAPVTIAQRPVIRHLR 171
+SRS HPS E R TP RR + + +R S +P T+ V+ +
Sbjct: 47 LSRSPRHPSPLEPIPPPVHRRTPHHSDQCRRRTPSSAHRPDRHSPSPHTL----VLGQMG 102
Query: 172 TRPVEVQQLPRR--RDPQHAE-CALQARSRPGFNTPCLIACIESLIRLKRWGGAILIHNK 342
T V V +P R R P+H++ C ++ +AC S++RLK G ++L K
Sbjct: 103 TTAVAVALIPPRPTRGPRHSQPCPRDPATKQWLEVAGELACHSSVMRLKLLGPSVLESGK 162
>03_06_0437 -
33912326-33912520,33912870-33912998,33913147-33913317,
33913877-33913993,33914150-33914800
Length = 420
Score = 33.5 bits (73), Expect = 0.082
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +1
Query: 1 RISRSNHPSASEGGGERVTPDAGFGPRRSISPAVTQRERRSDAPVTIAQRPVIRHLRTRP 180
R R + P ASE G + D P + + P TQ + + +RP+I +R RP
Sbjct: 189 RGGRGSPPPASEPPGGATSLDEEDVPPQEVYPEGTQ------FMILLFERPIIYDVRARP 242
Query: 181 VEVQQLPRRRDPQHAECALQARSRP 255
V+ RD Q + L+ +RP
Sbjct: 243 NLVESTSGSRDLQMVKIGLRVLTRP 267
>05_07_0359 - 29539294-29540832,29542366-29542518
Length = 563
Score = 29.9 bits (64), Expect = 1.0
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 182 TGRVRRWRITGLWAIVTGASLLLSRCVTAGEIERRGPKPASGVTRSPPPSLAEG 21
T +RR R GL +++G S LLS TA RG P + +PP G
Sbjct: 91 TVHLRRLRSQGL-LLMSGHSYLLSTSATAARGRGRGRPPKKASSSAPPQKRGPG 143
>04_04_0433 +
25163111-25163471,25163943-25164154,25164420-25164701,
25164794-25164916,25165511-25165664,25165754-25165965,
25166143-25166212,25166294-25166424
Length = 514
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -1
Query: 227 SACCGS-RLRGSCWTSTGRVRRWRITGLW---AIVTGASLLLSRCVTAGEIERRGPKPAS 60
+AC S R R S W GR+ R R+ G A A ++ RC + G G PA
Sbjct: 24 TACTSSSRRRASPWGGAGRLIRLRLRGHCPSPASARAARVVSPRCSSYGAAADAGESPAE 83
Query: 59 GVTR 48
+ R
Sbjct: 84 ALRR 87
>05_04_0319 +
20171486-20171800,20171882-20171956,20172160-20172195,
20172302-20172413,20173082-20173152,20173287-20173417,
20173718-20173783,20174003-20174103,20174311-20174370,
20174463-20174496,20174852-20174950,20175019-20175078,
20175700-20175874,20175900-20175950,20176603-20176632
Length = 471
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 215 GSRLRGSCWTSTGRVRRW 162
G + SCWTST RV+ W
Sbjct: 317 GDEVNTSCWTSTPRVKAW 334
>04_01_0009 -
178579-178638,179151-179246,179504-179565,180181-180245,
181271-181363,181489-181592,182070-182153,182223-182303,
182829-182880,183048-183119,183411-183486,183568-183680,
184056-184203,184295-184372,184511-184640,184733-184923,
187039-187099,187201-187371
Length = 578
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 320 PPHLFRRIRDSMHAIRQGVLKP 255
PP L+ +IRD HA R G+ P
Sbjct: 118 PPFLYWKIRDFAHAYRSGITTP 139
>03_02_0898 -
12246747-12246833,12247425-12247601,12248054-12248176,
12248545-12248766,12249556-12249606,12249712-12249987
Length = 311
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 160 RHLRTRPVEVQQLPRRRDPQHAECALQARSRPGFNTPCLIACIE 291
RHL P V PRRR A A+++ RP L+AC++
Sbjct: 33 RHLP--PSSVSLRPRRRSIAAASAAVESAGRPLLEARDLVACVK 74
>02_01_0232 +
1543597-1543800,1544189-1544377,1544695-1544859,
1545199-1545459,1546059-1546271,1546365-1546587,
1547974-1548149
Length = 476
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 294 PYSPEEMGWCYPNT**INKWNCYSR 368
P PE MGW YP I ++ CY R
Sbjct: 169 PSCPERMGWRYPG---IGEFQCYDR 190
>09_03_0216 - 13529869-13530894
Length = 341
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 28 ASEGGGERVTPDAGFGPRRSISPAVTQ-RERRSDAPVTIAQRPV 156
A +GG V P A R +PAV + ERR+D P +A RPV
Sbjct: 25 ARDGGTGLVVPPARRARRDPGAPAVVEPPERRADVP-ALALRPV 67
>07_03_0314 +
16669072-16669553,16669936-16671106,16671394-16672042,
16672165-16672187
Length = 774
Score = 27.9 bits (59), Expect = 4.1
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 296 RDSMHAIRQGVLKP-GRERACSAHSACCGSRLRG-SCWTSTGRV 171
RD++ A R +L P GR S HS C R RG C STG V
Sbjct: 41 RDALAAFRASLLDPAGRLATWSGHSCC---RWRGVHCDGSTGHV 81
>11_01_0397 + 3006815-3007438
Length = 207
Score = 27.5 bits (58), Expect = 5.4
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -1
Query: 287 MHAIRQGVLKPGRERACSAHSACCGSRL-RGSCWTSTGRVRRWRITGLWAIVTGASLLLS 111
+HA V +PG+ A SA S G+ L + W G R + +V ASL L+
Sbjct: 117 LHAAAAAVSRPGQAAAASALSFAAGAALPLLAAWFVAGAYR----VRVVVVVATASLALA 172
Query: 110 RCVTAGEIERRGPKPASGV 54
AG R P +G+
Sbjct: 173 AFGAAGARLGRAPGGRAGL 191
>08_01_0072 -
513561-513926,514055-514189,514274-514417,514505-514744,
516325-516636
Length = 398
Score = 27.5 bits (58), Expect = 5.4
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Frame = +1
Query: 19 HPSASEGGGERVTPDAGFGPRRSISPAVTQRERRSDAPVTI-AQRP---VIRHLRTRPV 183
H GG DAG R I P T RR D P ++ +P V+ +L T+ +
Sbjct: 59 HQHLDAGGSMSRRIDAGGSMSRRIGPGSTSSRRRGDLPDSVTGAKPVQIVLENLETKKI 117
>07_01_1055 -
9253936-9254130,9254271-9254483,9254588-9254758,
9255743-9255859,9257021-9257186,9258885-9258934,
9259095-9259268
Length = 361
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 145 QRPVIRHLRTRPVEVQQLPRRRDPQHAECALQARSRP 255
+RP+I +R RP V+ RD Q + L+ +RP
Sbjct: 144 ERPIIYDVRARPNLVESTSGSRDLQMVKIGLRVLTRP 180
>07_01_0262 + 1957973-1958220,1958272-1958935
Length = 303
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -1
Query: 173 VRRWRITGLWAIVTGASLLLSRCVTAGEIERRGPKPASGVTRSPPPS 33
VRRWR T W +S S V G RR P PA+ + P+
Sbjct: 76 VRRWRATRSWLRQASSS---SAPVAVGCPTRRRPSPAAAAEKCSLPA 119
>04_04_0910 -
29321128-29321276,29321977-29322508,29323301-29323706,
29323933-29324028,29324563-29324645,29326620-29326732,
29327156-29327315
Length = 512
Score = 27.5 bits (58), Expect = 5.4
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -1
Query: 284 HAIRQGVLKPGRERA-CSAHSACCGSRLRGSCWTSTGRVRRWRITGLWAIVTGA 126
HA R G G E A S H AC G LR S + RR R++ W T A
Sbjct: 310 HARRDG---RGSEAARMSRHGACAGGALRPSARRPSAVGRRPRVSVAWPGQTAA 360
>07_03_0832 -
21823518-21823826,21823920-21824070,21824148-21824385,
21824469-21824679,21824789-21825009,21825590-21825697,
21825813-21826142,21826740-21827050,21828969-21829651
Length = 853
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 140 LPRGP*SATYGRARSKSSNSPADETHSTQSARCKLVHDR 256
+PR P +GR+ S +S D++HS + +H R
Sbjct: 815 MPRPPTLMLHGRSAETSKSSEKDQSHSIGTVSMTQLHGR 853
>07_01_0119 - 908600-909592,909685-909885
Length = 397
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 395 CLLKIKCIRSRITIPFIYLLCIRIAPPHLFRRI 297
C+ + C RS++ YLL +R++P H R I
Sbjct: 87 CVKTVACGRSQLFSKVAYLLGLRVSPRHRRRGI 119
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 2 ASPGATTLQQVKGEESV*PPMLVLVRVAQSLPP 100
+SP TTLQQ+ +S PP L V PP
Sbjct: 41 SSPTQTTLQQLHSPDSPPPPPLPTPTVTTPTPP 73
>03_06_0626 -
35169352-35169546,35169736-35169948,35170102-35170272,
35170826-35170942,35171078-35171233
Length = 283
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 145 QRPVIRHLRTRPVEVQQLPRRRDPQHAECALQARSRP 255
+RP+I +R RP V+ RD Q L+ +RP
Sbjct: 66 ERPIIYDVRARPNLVESTSGSRDLQMVRIGLRVLTRP 102
>03_05_1048 - 29950860-29951396,29951810-29952676
Length = 467
Score = 27.1 bits (57), Expect = 7.2
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +1
Query: 55 TPDAGFGPRRSISPAVTQRERRSDAPVTIAQRPVIRHLRTRPVEVQQLPRRRDPQHAECA 234
+P+ G G RR+ P + + PV+ RPV R +PV + P A
Sbjct: 143 SPEIGIGDRRTDYPFMRLCKEGYVVPVSPTPRPVPREELPKPVVFHDGRLVQKPSPALAL 202
Query: 235 LQARSRP-GFNTPCLIACIESLIRLK 309
L P GF CL +L+ ++
Sbjct: 203 LTVLWIPIGFVLACLRIAAGALLPMR 228
>03_02_0371 + 7858170-7859624
Length = 484
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -1
Query: 245 RACSAHSACCGSRLRGSCWT----STGRVRRWRITGLWAIVTGASLLLSRCVTAGEIERR 78
R+ S + G+ W ++ RVRR GL +VTGA+ + C A + RR
Sbjct: 83 RSLHTSSPSAAATWGGAAWEKKVRASARVRRANGRGLTVLVTGAAGFVG-CHAAAALRRR 141
Query: 77 G 75
G
Sbjct: 142 G 142
>02_05_0570 + 30070338-30071606
Length = 422
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 19 HPSASEGGGERVTPDAGFGPRRSISPA 99
HP + GGGERV +G P SPA
Sbjct: 86 HPELAGGGGERVLMVSGSQPEPCGSPA 112
>11_04_0125 +
13723966-13724011,13724282-13724430,13725100-13725197,
13725321-13725528,13725678-13725695
Length = 172
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 203 RGSCWTSTGRVRRWRITGLWAIVTGASLLLSRCV 102
R + GR RW + G A+VTG S + R +
Sbjct: 68 RNMASSGAGRDERWILAGATALVTGRSKGIGRAI 101
>11_01_0521 +
4083594-4083763,4083765-4083963,4084059-4084244,
4085834-4086025,4086979-4087200,4089238-4089444,
4089681-4090082,4090201-4090230,4090307-4090318
Length = 539
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 444 IEWDISDSINVLIQNILSIKNKVYTFANNNSIYL 343
+E D+S +I Q I +++NKV NNN +L
Sbjct: 302 VEQDLSANITQHGQQIQTLQNKVQLQTNNNEAHL 335
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 1 RISRSNHPSASEGGG-ERVTPDAGFGPRRSISPAVTQRERR 120
++ +S PS GGG ERV G +R + P ++++R
Sbjct: 254 KMPKSRPPSPPRGGGAERVADRPPAGHKRPVEPEAGRKKKR 294
>04_04_0903 - 29269794-29270141,29270227-29270751
Length = 290
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 1 RISRSNHPSASEGGGERVTPDA 66
R+S H A GG R TPDA
Sbjct: 260 RVSMVGHVRAPSAGGSRTTPDA 281
>01_06_1626 -
38734128-38734160,38734386-38734560,38734819-38734878,
38734961-38735059,38735191-38735224,38735315-38735374,
38735596-38735696,38735949-38736014,38736695-38736825,
38736946-38737038,38737273-38737338,38737459-38737494,
38738308-38738382,38738475-38738792
Length = 448
Score = 26.6 bits (56), Expect = 9.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 215 GSRLRGSCWTSTGRVRRW 162
G + SCWT+T +++W
Sbjct: 310 GDEVNTSCWTATPHIKKW 327
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,600,023
Number of Sequences: 37544
Number of extensions: 300327
Number of successful extensions: 1216
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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