Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2327
         (751 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78541-1|CAB01740.1|  452|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z82081-4|CAB04957.1|  134|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z83115-2|CAE17889.1|  373|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z47067-2|CAA87329.1|  498|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z78541-1|CAB01740.1|  452|Caenorhabditis elegans Hypothetical
           protein F19D8.1 protein.
          Length = 452

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -2

Query: 315 YGSSGLALPLVLLKFMGDGNHSPSSGPYARLSKRAIKKRSDCVYSLSLHEVSNY 154
           YG+ G+ L L+ +  +G  + +       ++SKR +KK+SD      + EVS Y
Sbjct: 175 YGAFGIPLFLITIADLGRFSKTAIMALVQKVSKRELKKQSDEHLLREIAEVSPY 228


>Z82081-4|CAB04957.1|  134|Caenorhabditis elegans Hypothetical
           protein W09H1.4 protein.
          Length = 134

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = -2

Query: 501 GLYKPQLLLDLKVLKSMKSYVLGFSNKWIFLSTFISITMTTNHIIEGARHDAFFIDTV 328
           G +K +++     L  +KSY   + N  +FL TF   +MTT+ I +  +     ID++
Sbjct: 11  GWFKDEIMPRAMELAKVKSYTAHYDNHGVFLDTF---SMTTDLIEDEKKIKDRIIDSI 65


>Z83115-2|CAE17889.1|  373|Caenorhabditis elegans Hypothetical
           protein K11D2.5 protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 698 NPQVNSPIFFFKFDGQSFAKSCT*MRRLLTVFR 600
           +P    P  FF+   +  AK+C  MRRLL +FR
Sbjct: 2   DPHQFFPFSFFQKITEKNAKNCQKMRRLLPIFR 34


>Z47067-2|CAA87329.1|  498|Caenorhabditis elegans Hypothetical
           protein C43C3.2 protein.
          Length = 498

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
 Frame = -3

Query: 701 CNP---QVNSPIFFFKFDGQSFAKSCT*MRRLLTVFRSQ*HFAVKNPCKHHVKHKCNYLF 531
           C+P   +V +    F F G  F  +C  +  +L    S+ HF +    +H +  KC   F
Sbjct: 158 CHPLQVRVRNQRTVFVFLGIMFFVTCVMLSPILLYAHSKVHFIITETYRHLIMQKCLRFF 217

Query: 530 ---VFFFWVKSLEVY 495
              V FF ++ L ++
Sbjct: 218 EGSVTFFGLQELVMH 232


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,581,333
Number of Sequences: 27780
Number of extensions: 306153
Number of successful extensions: 681
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)