Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2317
         (382 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    27   0.098
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   2.1  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    22   2.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   4.9  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 26.6 bits (56), Expect = 0.098
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +2

Query: 11  HLKRLNASKAWDVGQTWRCVCTETVNRSPQVARVLAPGDFTE 136
           HL   + S+ +DV ++WR +  E  NR+    R++    +TE
Sbjct: 255 HLYTRDQSETYDVLRSWRNLMDEHSNRTNSDPRMILTEAYTE 296


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 74  TETVNRSPQVARVLAPGDFTEEFFEV 151
           T  V +     R L P DFTE+  E+
Sbjct: 70  TLNVEKLESGTRELTPDDFTEDVHEI 95


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 74  TETVNRSPQVARVLAPGDFTEEFFEV 151
           T  V +     R L P DFTE+  E+
Sbjct: 70  TLNVEKLESGTRELTPDDFTEDVHEI 95


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 361 TCILASSGVIRSNCK 317
           TC+    G+ +S CK
Sbjct: 135 TCLYVPPGIFKSTCK 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,312
Number of Sequences: 438
Number of extensions: 1876
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)